RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD28	YDR030C	RVB1	Q03940	463 aa	Known RBP	4.07	□□□□□ -1.76
RAD28	YDR030C	MIM1	Q08176	113 aa		4.07	□□□□□ -1.76
RAD28	YDR030C	HNT3	Q08702	217 aa		4.07	□□□□□ -1.76
RAD28	YDR030C	USV1	Q12132	391 aa		4.07	□□□□□ -1.76
RAD28	YDR030C	YLR108C	Q12259	485 aa		4.07	□□□□□ -1.76
RAD28	YDR030C	PAR32	Q12515	295 aa	Known RBP	4.07	□□□□□ -1.76
RAD28	YDR030C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.07	□□□□□ -1.76
RAD28	YDR030C	REP2	P03872	296 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	HNM1	P19807	563 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	CPR4	P25334	318 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	EHD3	P28817	500 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	PDC2	P32896	925 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	PPZ2	P33329	710 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	SRY1	P36007	326 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	FLO10	P36170	1169 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	COS8	P38723	381 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RAD28	YDR030C	GLR1	P41921	483 aa	Known RBP	4.06	□□□□□ -1.76
RAD28	YDR030C	IDP2	P41939	412 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	ERJ5	P43613	295 aa	Predicted RBP	4.06	□□□□□ -1.76
RAD28	YDR030C	HAM1	P47119	197 aa	Known RBP	4.06	□□□□□ -1.76
RAD28	YDR030C	LCL3	P53153	274 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	YGR066C	P53242	292 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	YGR151C	P53287	111 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	INN1	P53901	409 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	NRK1	P53915	240 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	SMX3	P54999	86 aa	Predicted RBP	4.06	□□□□□ -1.76
RAD28	YDR030C	HNT1	Q04344	158 aa	Known RBP	4.06	□□□□□ -1.76
RAD28	YDR030C	YPR147C	Q06522	304 aa	Known RBP	4.06	□□□□□ -1.76
RAD28	YDR030C	YDL086W	Q07505	273 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	SRL2	Q12020	392 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	YRA1	Q12159	226 aa	Known RBP	4.06	□□□□□ -1.76
RAD28	YDR030C	HMS1	Q12398	434 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	EAF3	Q12432	401 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	YHR213W-A	Q8TGT4	77 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	PET20	Q99373	253 aa		4.06	□□□□□ -1.76
RAD28	YDR030C	SEC22	P22214	214 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	SCO1	P23833	295 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	CPR3	P25719	182 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	VMA8	P32610	256 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	FMT1	P32785	401 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	EMP24	P32803	203 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	CBT1	P36038	271 aa	Predicted RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	FRM2	P37261	193 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	UMP1	P38293	148 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	YPC1	P38298	316 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	LSM12	P38828	187 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	YHR210C	P38893	341 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	GCV3	P39726	170 aa	Predicted RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	SSO2	P39926	295 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	YJR111C	P47148	283 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	YGR126W	P53274	230 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	ATG4	P53867	494 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	AAH1	P53909	347 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	YDR249C	Q03787	373 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	CTS2	Q06350	511 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	NOC4	Q06512	552 aa	Predicted RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	ARR3	Q06598	404 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	MCH4	Q08268	501 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	YRM1	Q12340	786 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	TFC7	Q12415	435 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	YJR112W-A	Q3E743	109 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	YAL064W-B	O13512	126 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	SCEI	P03882	235 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	SSA3	P09435	649 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	CNB1	P25296	175 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	TIP1	P27654	210 aa	Predicted RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	VMA5	P31412	392 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	MCM10	P32354	571 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	ARO4	P32449	370 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	ELF1	P36053	145 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RAD28	YDR030C	ASP1	P38986	381 aa	Predicted RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	SLZ1	P40167	298 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	NIF3	P53081	288 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	RNH201	P53942	307 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	ACS1	Q01574	713 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	YML018C	Q03730	393 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	SYM1	Q06563	197 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	RDL2	Q08742	149 aa	Known RBP	4.05	□□□□□ -1.76
RAD28	YDR030C	MCT1	Q12283	360 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	FRE7	Q12333	620 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	RRI1	Q12468	440 aa		4.05	□□□□□ -1.76
RAD28	YDR030C	TPI1	P00942	248 aa	Known RBP	4.04	□□□□□ -1.76
RAD28	YDR030C	TRR1	P29509	319 aa	Known RBP	4.04	□□□□□ -1.76
RAD28	YDR030C	ERG3	P32353	365 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	ECM25	P32525	599 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	SRB6	P32570	121 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	YBL010C	P32788	280 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	POP8	P38208	133 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	YER010C	P40011	234 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	YIR035C	P40579	254 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	YHC3	P47040	408 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	SRB7	P47822	140 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	SNN1	P48232	102 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	UBP8	P50102	471 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	YGL159W	P53110	370 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	YPL039W	Q03080	316 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	YDR248C	Q03786	193 aa		4.04	□□□□□ -1.76
RAD28	YDR030C	CAB5	Q03941	241 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms