RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C ARO7P32178 256 aa4.94□□□□□ -1.62
PDB1YBR221C SPT4P32914 102 aaPredicted RBP4.94□□□□□ -1.62
PDB1YBR221C YBR096WP38256 230 aa4.94□□□□□ -1.62
PDB1YBR221C ARC40P38328 384 aaKnown RBP4.94□□□□□ -1.62
PDB1YBR221C MDM31P38880 579 aa4.94□□□□□ -1.62
PDB1YBR221C LYS1P38998 373 aaRIP-Chip data4.94□□□□□ -1.62not detected
PDB1YBR221C GLE2P40066 365 aa4.94□□□□□ -1.62
PDB1YBR221C LSM4P40070 187 aaKnown RBP4.94□□□□□ -1.62
PDB1YBR221C PSA1P41940 361 aaKnown RBP4.94□□□□□ -1.62
PDB1YBR221C PMT4P46971 762 aa4.94□□□□□ -1.62
PDB1YBR221C ASN1P49089 572 aaKnown RBP4.94□□□□□ -1.62
PDB1YBR221C UBC13P52490 153 aa4.94□□□□□ -1.62
PDB1YBR221C COS1P53822 381 aa4.94□□□□□ -1.62
PDB1YBR221C HCH1P53834 153 aa4.94□□□□□ -1.62
PDB1YBR221C ERG5P54781 538 aa4.94□□□□□ -1.62
PDB1YBR221C TRS23Q03784 219 aa4.94□□□□□ -1.62
PDB1YBR221C PLP1Q04004 230 aa4.94□□□□□ -1.62
PDB1YBR221C YLR012CQ07927 99 aa4.94□□□□□ -1.62
PDB1YBR221C MMT2Q08970 484 aa4.94□□□□□ -1.62
PDB1YBR221C YOR214CQ12282 236 aa4.94□□□□□ -1.62
PDB1YBR221C ORT1Q12375 292 aa4.94□□□□□ -1.62
PDB1YBR221C YDL085C-AQ3E7B7 68 aaKnown RBP4.94□□□□□ -1.62
PDB1YBR221C YKL068W-AQ3E826 78 aa4.94□□□□□ -1.62
PDB1YBR221C RIB3Q99258 208 aa4.94□□□□□ -1.62
PDB1YBR221C MRPS28P21771 286 aa4.93□□□□□ -1.62
PDB1YBR221C MRPL24P36525 258 aaPredicted RBP4.93□□□□□ -1.62
PDB1YBR221C YBR053CP38235 358 aa4.93□□□□□ -1.62
PDB1YBR221C SLM6P38343 150 aa4.93□□□□□ -1.62
PDB1YBR221C LAG1P38703 411 aa4.93□□□□□ -1.62
PDB1YBR221C YMR144WP40214 342 aaKnown RBP4.93□□□□□ -1.62
PDB1YBR221C AIR1P40507 360 aaKnown RBP4.93□□□□□ -1.62
PDB1YBR221C FAR7P43592 221 aa4.93□□□□□ -1.62
PDB1YBR221C MCM22P47167 239 aa4.93□□□□□ -1.62
PDB1YBR221C MUP1P50276 574 aa4.93□□□□□ -1.62
PDB1YBR221C SCW11P53189 542 aa4.93□□□□□ -1.62
PDB1YBR221C RNY1Q02933 434 aaKnown RBP4.93□□□□□ -1.62
PDB1YBR221C YDR249CQ03787 373 aa4.93□□□□□ -1.62
PDB1YBR221C TY1A-MR1Q04215 440 aa4.93□□□□□ -1.62
PDB1YBR221C YDR278CQ05612 105 aa4.93□□□□□ -1.62
PDB1YBR221C GAT3Q07928 141 aa4.93□□□□□ -1.62
PDB1YBR221C YPL257WQ08974 193 aa4.93□□□□□ -1.62
PDB1YBR221C SRL2Q12020 392 aa4.93□□□□□ -1.62
PDB1YBR221C ATP16Q12165 160 aa4.93□□□□□ -1.62
PDB1YBR221C MDM32Q12171 622 aa4.93□□□□□ -1.62
PDB1YBR221C YLR046CQ12253 270 aa4.93□□□□□ -1.62
PDB1YBR221C TY1A-BLQ12266 440 aa4.93□□□□□ -1.62
PDB1YBR221C ATP14Q12349 124 aa4.93□□□□□ -1.62
PDB1YBR221C MRX4Q12467 430 aa4.93□□□□□ -1.62
PDB1YBR221C YPL119C-AQ3E751 87 aa4.93□□□□□ -1.62
PDB1YBR221C IGO2Q9P305 131 aa4.93□□□□□ -1.62
PDB1YBR221C RPL25P04456 142 aaKnown RBP4.92□□□□□ -1.62
PDB1YBR221C MET2P08465 486 aa4.92□□□□□ -1.62
PDB1YBR221C GCN3P14741 305 aa4.92□□□□□ -1.62
PDB1YBR221C SPO12P17123 173 aa4.92□□□□□ -1.62
PDB1YBR221C RPS1BP23248 255 aaKnown RBP4.92□□□□□ -1.62
PDB1YBR221C PRE7P23724 241 aaKnown RBP4.92□□□□□ -1.62
PDB1YBR221C SCO1P23833 295 aa4.92□□□□□ -1.62
PDB1YBR221C MRPL9P31334 269 aa4.92□□□□□ -1.62
PDB1YBR221C TSA1P34760 196 aaKnown RBP4.92□□□□□ -1.62
PDB1YBR221C YBR285WP38354 144 aa4.92□□□□□ -1.62
PDB1YBR221C YHR127WP38833 243 aaKnown RBP4.92□□□□□ -1.62
PDB1YBR221C ECM14P38836 430 aa4.92□□□□□ -1.62
PDB1YBR221C MST28P39552 234 aa4.92□□□□□ -1.62
PDB1YBR221C PGD1P40356 397 aa4.92□□□□□ -1.62
PDB1YBR221C NMA2P53204 395 aa4.92□□□□□ -1.62
PDB1YBR221C YGR017WP53210 297 aa4.92□□□□□ -1.62
PDB1YBR221C YNL040WP53960 456 aaPredicted RBP4.92□□□□□ -1.62
PDB1YBR221C ARK1P53974 638 aa4.92□□□□□ -1.62
PDB1YBR221C TIM8P57744 87 aa4.92□□□□□ -1.62
PDB1YBR221C USV1Q12132 391 aa4.92□□□□□ -1.62
PDB1YBR221C AHA1Q12449 350 aaKnown RBP4.92□□□□□ -1.62
PDB1YBR221C MRS1P07266 363 aa4.91□□□□□ -1.62
PDB1YBR221C PBI2P0CT04 75 aaKnown RBP4.91□□□□□ -1.62
PDB1YBR221C FPR1P20081 114 aaKnown RBP4.91□□□□□ -1.62
PDB1YBR221C NUP1P20676 1076 aa4.91□□□□□ -1.62
PDB1YBR221C LSB5P25369 354 aa4.91□□□□□ -1.62
PDB1YBR221C KAR4P25583 335 aa4.91□□□□□ -1.62
PDB1YBR221C CPR3P25719 182 aa4.91□□□□□ -1.62
PDB1YBR221C BUB3P26449 341 aa4.91□□□□□ -1.62
PDB1YBR221C OAC1P32332 324 aa4.91□□□□□ -1.62
PDB1YBR221C UGX2P32772 223 aa4.91□□□□□ -1.62
PDB1YBR221C YPC1P38298 316 aa4.91□□□□□ -1.62
PDB1YBR221C YHK8P38776 514 aa4.91□□□□□ -1.62
PDB1YBR221C GEP4P38812 185 aa4.91□□□□□ -1.62
PDB1YBR221C VMA7P39111 118 aa4.91□□□□□ -1.62
PDB1YBR221C RFC2P40348 353 aa4.91□□□□□ -1.62
PDB1YBR221C MEP2P41948 499 aa4.91□□□□□ -1.62
PDB1YBR221C YIP1P53039 248 aa4.91□□□□□ -1.62
PDB1YBR221C MRX11Q03079 207 aa4.91□□□□□ -1.62
PDB1YBR221C BET5Q03630 159 aa4.91□□□□□ -1.62
PDB1YBR221C UTP15Q04305 513 aaKnown RBP4.91□□□□□ -1.62
PDB1YBR221C SEI1Q06058 285 aa4.91□□□□□ -1.62
PDB1YBR221C BSP1Q06604 576 aa4.91□□□□□ -1.62
PDB1YBR221C ZEO1Q08245 113 aa4.91□□□□□ -1.62
PDB1YBR221C MHT1Q12525 324 aa4.91□□□□□ -1.62
PDB1YBR221C CDC6P09119 513 aa4.9□□□□□ -1.63
PDB1YBR221C HIS7P33734 552 aaKnown RBP4.9□□□□□ -1.63
PDB1YBR221C FRE2P36033 711 aa4.9□□□□□ -1.63
PDB1YBR221C YBR137WP38276 179 aa4.9□□□□□ -1.63
PDB1YBR221C SIM1P40472 476 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms