RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C YBL112CQ3E7Y4 105 aa3.35□□□□□ -1.87
NPL4YBR170C AST1P35183 429 aa3.34□□□□□ -1.87
NPL4YBR170C GRE3P38715 327 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
NPL4YBR170C PEX17P40155 199 aa3.34□□□□□ -1.87
NPL4YBR170C PRE5P40302 234 aaKnown RBP3.34□□□□□ -1.87
NPL4YBR170C YJL028WP47062 111 aa3.34□□□□□ -1.87
NPL4YBR170C BXI1P48558 297 aa3.34□□□□□ -1.87
NPL4YBR170C HAL1Q01766 294 aa3.34□□□□□ -1.87
NPL4YBR170C TVP15Q03860 143 aa3.34□□□□□ -1.87
NPL4YBR170C YDL211CQ12121 372 aa3.34□□□□□ -1.87
NPL4YBR170C SWI1P09547 1314 aa3.34□□□□□ -1.88
NPL4YBR170C RPL35AP0CX84 120 aaKnown RBP3.33□□□□□ -1.88
NPL4YBR170C RPL35BP0CX85 120 aaKnown RBP3.33□□□□□ -1.88
NPL4YBR170C PRE7P23724 241 aaKnown RBP3.33□□□□□ -1.88
NPL4YBR170C BDH1P39714 382 aa3.33□□□□□ -1.88
NPL4YBR170C YPL150WQ12152 901 aa3.33□□□□□ -1.88
NPL4YBR170C AUS1Q08409 1394 aa3.33□□□□□ -1.88
NPL4YBR170C IKI3Q06706 1349 aaKnown RBP3.33□□□□□ -1.88
NPL4YBR170C OAC1P32332 324 aa3.33□□□□□ -1.88
NPL4YBR170C SSH1P38353 490 aaKnown RBP3.33□□□□□ -1.88
NPL4YBR170C YHR139C-AO13536 103 aa3.32□□□□□ -1.88
NPL4YBR170C YOL163WP0CF20 169 aa3.32□□□□□ -1.88
NPL4YBR170C GCN3P14741 305 aa3.32□□□□□ -1.88
NPL4YBR170C SNF6P18888 332 aa3.32□□□□□ -1.88
NPL4YBR170C ECM13P38195 257 aa3.32□□□□□ -1.88
NPL4YBR170C MMS2P53152 137 aa3.32□□□□□ -1.88
NPL4YBR170C SMD1Q02260 146 aaPredicted RBP3.32□□□□□ -1.88
NPL4YBR170C PIN3Q06449 215 aa3.32□□□□□ -1.88
NPL4YBR170C YOL019WQ08157 551 aa3.32□□□□□ -1.88
NPL4YBR170C SMT3Q12306 101 aaKnown RBP3.32□□□□□ -1.88
NPL4YBR170C RPS19AP07280 144 aaKnown RBP3.31□□□□□ -1.88
NPL4YBR170C RPS19BP07281 144 aaPredicted RBP3.31□□□□□ -1.88
NPL4YBR170C UTH1P36135 365 aa3.31□□□□□ -1.88
NPL4YBR170C YER189WP40104 122 aa3.31□□□□□ -1.88
NPL4YBR170C YJR141WP47172 347 aaPredicted RBP3.31□□□□□ -1.88
NPL4YBR170C YMR279CQ03263 540 aa3.31□□□□□ -1.88
NPL4YBR170C YDR248CQ03786 193 aa3.31□□□□□ -1.88
NPL4YBR170C YNG1Q08465 219 aa3.31□□□□□ -1.88
NPL4YBR170C PAN1P32521 1480 aa3.31□□□□□ -1.88
NPL4YBR170C FBA1P14540 359 aaKnown RBP3.3□□□□□ -1.88
NPL4YBR170C CPT1P17898 393 aa3.3□□□□□ -1.88
NPL4YBR170C CKA2P19454 339 aa3.3□□□□□ -1.88
NPL4YBR170C VPS51P36116 164 aa3.3□□□□□ -1.88
NPL4YBR170C MRPL28P36527 147 aa3.3□□□□□ -1.88
NPL4YBR170C TRM7P38238 310 aaKnown RBP3.3□□□□□ -1.88
NPL4YBR170C TEM1P38987 245 aa3.3□□□□□ -1.88
NPL4YBR170C SUR2P38992 349 aa3.3□□□□□ -1.88
NPL4YBR170C COG3P40094 801 aa3.3□□□□□ -1.88
NPL4YBR170C POG1P40473 351 aa3.3□□□□□ -1.88
NPL4YBR170C COQ5P49017 307 aa3.3□□□□□ -1.88
NPL4YBR170C EFM5P53200 248 aaKnown RBP3.3□□□□□ -1.88
NPL4YBR170C YGR067CP53243 804 aa3.3□□□□□ -1.88
NPL4YBR170C YLR179CQ06252 201 aaKnown RBP3.3□□□□□ -1.88
NPL4YBR170C YPL264CQ08980 353 aa3.3□□□□□ -1.88
NPL4YBR170C EMP46Q12396 444 aa3.3□□□□□ -1.88
NPL4YBR170C DRS2P39524 1355 aa3.3□□□□□ -1.88
NPL4YBR170C PRY2P36110 329 aa3.3□□□□□ -1.88
NPL4YBR170C CAT5P41735 233 aa3.3□□□□□ -1.88
NPL4YBR170C ERV29P53337 310 aa3.3□□□□□ -1.88
NPL4YBR170C YIP3P53633 176 aa3.3□□□□□ -1.88
NPL4YBR170C YPL247CQ12523 523 aa3.3□□□□□ -1.88
NPL4YBR170C IPP1P00817 287 aaKnown RBP3.29□□□□□ -1.88
NPL4YBR170C YAK1P14680 807 aa3.29□□□□□ -1.88
NPL4YBR170C BMH1P29311 267 aaKnown RBP3.29□□□□□ -1.88
NPL4YBR170C SFC1P33303 322 aa3.29□□□□□ -1.88
NPL4YBR170C APS1P35181 156 aa3.29□□□□□ -1.88
NPL4YBR170C ECM14P38836 430 aa3.29□□□□□ -1.88
NPL4YBR170C SPL2P38839 148 aa3.29□□□□□ -1.88
NPL4YBR170C FAR7P43592 221 aa3.29□□□□□ -1.88
NPL4YBR170C ILM1P47155 203 aa3.29□□□□□ -1.88
NPL4YBR170C YGL159WP53110 370 aa3.29□□□□□ -1.88
NPL4YBR170C SLD7Q08457 257 aa3.29□□□□□ -1.88
NPL4YBR170C YEL009C-AA0A023PZF2 135 aa3.28□□□□□ -1.88
NPL4YBR170C SEC22P22214 214 aa3.28□□□□□ -1.88
NPL4YBR170C SEO1P39709 593 aa3.28□□□□□ -1.88
NPL4YBR170C YJL016WP47072 561 aa3.28□□□□□ -1.88
NPL4YBR170C PET191Q02772 108 aa3.28□□□□□ -1.88
NPL4YBR170C MRX8Q05473 314 aa3.28□□□□□ -1.88
NPL4YBR170C USB1Q12208 290 aaKnown RBP3.28□□□□□ -1.88
NPL4YBR170C PRR2Q12310 699 aa3.28□□□□□ -1.88
NPL4YBR170C ISD11Q6Q560 94 aa3.28□□□□□ -1.88
NPL4YBR170C NUP157P40064 1391 aaKnown RBP3.28□□□□□ -1.88
NPL4YBR170C TOM40P23644 387 aaKnown RBP3.27□□□□□ -1.89
NPL4YBR170C ECM33P38248 429 aaKnown RBP3.27□□□□□ -1.89
NPL4YBR170C YFL012WP43580 148 aa3.27□□□□□ -1.89
NPL4YBR170C YJR056CP47115 236 aa3.27□□□□□ -1.89
NPL4YBR170C MDM34P53083 459 aa3.27□□□□□ -1.89
NPL4YBR170C RSM27P53305 110 aa3.27□□□□□ -1.89
NPL4YBR170C SNO1Q03144 224 aa3.27□□□□□ -1.89
NPL4YBR170C YET3Q07451 203 aa3.27□□□□□ -1.89
NPL4YBR170C PST1Q12355 444 aa3.27□□□□□ -1.89
NPL4YBR170C YLR462WO13556 202 aa3.27□□□□□ -1.89
NPL4YBR170C SEC4P07560 215 aaKnown RBP3.27□□□□□ -1.89
NPL4YBR170C CUP2P15315 225 aa3.27□□□□□ -1.89
NPL4YBR170C LDB16P25587 256 aa3.27□□□□□ -1.89
NPL4YBR170C SHG1P38337 142 aa3.27□□□□□ -1.89
NPL4YBR170C YEL075CP39972 122 aa3.27□□□□□ -1.89
NPL4YBR170C SCW10Q04951 389 aa3.27□□□□□ -1.89
NPL4YBR170C YLR030WQ07967 263 aa3.27□□□□□ -1.89
NPL4YBR170C CAF4P36130 643 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms