RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YPL229WQ99395 206 aa1.62□□□□□ -2.15
SNC1YAL030W YIL177CP40434 1758 aa1.62□□□□□ -2.15
SNC1YAL030W YJL225CP40889 1758 aa1.62□□□□□ -2.15
SNC1YAL030W QCR6P00127 147 aa1.61□□□□□ -2.15
SNC1YAL030W RPL27AP0C2H6 136 aaKnown RBP1.61□□□□□ -2.15
SNC1YAL030W RPL27BP0C2H7 136 aaKnown RBP1.61□□□□□ -2.15
SNC1YAL030W MATALPHA2P0CY08 210 aa1.61□□□□□ -2.15
SNC1YAL030W HMLALPHA2P0CY09 210 aa1.61□□□□□ -2.15
SNC1YAL030W URA6P15700 204 aa1.61□□□□□ -2.15
SNC1YAL030W MER1P16523 270 aa1.61□□□□□ -2.15
SNC1YAL030W SEC22P22214 214 aa1.61□□□□□ -2.15
SNC1YAL030W RFA3P26755 122 aaKnown RBP1.61□□□□□ -2.15
SNC1YAL030W PEX17P40155 199 aa1.61□□□□□ -2.15
SNC1YAL030W IRC18P47056 224 aa1.61□□□□□ -2.15
SNC1YAL030W ILM1P47155 203 aa1.61□□□□□ -2.15
SNC1YAL030W RMR1P53060 241 aa1.61□□□□□ -2.15
SNC1YAL030W ALG13P53178 202 aa1.61□□□□□ -2.15
SNC1YAL030W SNZ1Q03148 297 aa1.61□□□□□ -2.15
SNC1YAL030W FAR8Q05040 523 aa1.61□□□□□ -2.15
SNC1YAL030W YPR172WQ06608 200 aa1.61□□□□□ -2.15
SNC1YAL030W YRA1Q12159 226 aaKnown RBP1.61□□□□□ -2.15
SNC1YAL030W IES3Q12345 250 aa1.61□□□□□ -2.15
SNC1YAL030W LSO2Q3E772 92 aaKnown RBP1.61□□□□□ -2.15
SNC1YAL030W SGA1P08019 549 aa1.6□□□□□ -2.15
SNC1YAL030W TOM40P23644 387 aaKnown RBP1.6□□□□□ -2.15
SNC1YAL030W ADE1P27616 306 aa1.6□□□□□ -2.15
SNC1YAL030W RNP1P32385 249 aa1.6□□□□□ -2.15
SNC1YAL030W AST1P35183 429 aa1.6□□□□□ -2.15
SNC1YAL030W SRY1P36007 326 aa1.6□□□□□ -2.15
SNC1YAL030W RSM25P40496 264 aa1.6□□□□□ -2.15
SNC1YAL030W YIR035CP40579 254 aa1.6□□□□□ -2.15
SNC1YAL030W BUD13P46947 266 aaPredicted RBP1.6□□□□□ -2.15
SNC1YAL030W SYF2P53277 215 aaPredicted RBP1.6□□□□□ -2.15
SNC1YAL030W NOP19P53317 196 aaPredicted RBP1.6□□□□□ -2.15
SNC1YAL030W GIS2P53849 153 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15 RIP-Chip
SNC1YAL030W ALG9P53868 555 aaKnown RBP1.6□□□□□ -2.15
SNC1YAL030W FCF1Q05498 189 aaPredicted RBP1.6□□□□□ -2.15
SNC1YAL030W YPR063CQ12160 140 aa1.6□□□□□ -2.15
SNC1YAL030W PST1Q12355 444 aa1.6□□□□□ -2.15
SNC1YAL030W MRX4Q12467 430 aa1.6□□□□□ -2.15
SNC1YAL030W NOT5Q12514 560 aaPredicted RBP1.6□□□□□ -2.15
SNC1YAL030W YCL012CQ8J0M4 134 aa1.6□□□□□ -2.15
SNC1YAL030W SWI1P09547 1314 aa1.6□□□□□ -2.15
SNC1YAL030W DRS2P39524 1355 aa1.59□□□□□ -2.15
SNC1YAL030W YLR462WO13556 202 aa1.59□□□□□ -2.15
SNC1YAL030W QCR7P00128 127 aa1.59□□□□□ -2.15
SNC1YAL030W CBF1P17106 351 aa1.59□□□□□ -2.15
SNC1YAL030W TKL2P33315 681 aa1.59□□□□□ -2.15
SNC1YAL030W APS1P35181 156 aa1.59□□□□□ -2.15
SNC1YAL030W YCR087C-AP37263 153 aa1.59□□□□□ -2.15
SNC1YAL030W COS8P38723 381 aa1.59□□□□□ -2.15
SNC1YAL030W ECM14P38836 430 aa1.59□□□□□ -2.15
SNC1YAL030W YEL075CP39972 122 aa1.59□□□□□ -2.15
SNC1YAL030W FAR7P43592 221 aa1.59□□□□□ -2.15
SNC1YAL030W ECO1P43605 281 aa1.59□□□□□ -2.15
SNC1YAL030W YJR056CP47115 236 aa1.59□□□□□ -2.15
SNC1YAL030W MDM34P53083 459 aa1.59□□□□□ -2.15
SNC1YAL030W PRM8P53174 237 aa1.59□□□□□ -2.15
SNC1YAL030W HOP2P53187 214 aa1.59□□□□□ -2.15
SNC1YAL030W PDR17P53844 350 aa1.59□□□□□ -2.15
SNC1YAL030W YOL019WQ08157 551 aa1.59□□□□□ -2.15
SNC1YAL030W SLD7Q08457 257 aa1.59□□□□□ -2.15
SNC1YAL030W YPR011CQ12251 326 aa1.59□□□□□ -2.15
SNC1YAL030W TUS1Q06412 1307 aa1.59□□□□□ -2.16
SNC1YAL030W IPP1P00817 287 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W HIS3P06633 220 aa1.58□□□□□ -2.16
SNC1YAL030W SEC4P07560 215 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W ATP7P30902 174 aa1.58□□□□□ -2.16
SNC1YAL030W ERG24P32462 438 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W YPT52P36018 234 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W PRY2P36110 329 aa1.58□□□□□ -2.16
SNC1YAL030W TRM5P38793 499 aa1.58□□□□□ -2.16
SNC1YAL030W RPF1P38805 295 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W EGD2P38879 174 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W TIF34P40217 347 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W YIL001WP40560 513 aa1.58□□□□□ -2.16
SNC1YAL030W CAT5P41735 233 aa1.58□□□□□ -2.16
SNC1YAL030W YJR141WP47172 347 aaPredicted RBP1.58□□□□□ -2.16
SNC1YAL030W BXI1P48558 297 aa1.58□□□□□ -2.16
SNC1YAL030W MIG2P53035 382 aa1.58□□□□□ -2.16
SNC1YAL030W YGL159WP53110 370 aa1.58□□□□□ -2.16
SNC1YAL030W GTR2P53290 341 aa1.58□□□□□ -2.16
SNC1YAL030W ABF2Q02486 183 aa1.58□□□□□ -2.16
SNC1YAL030W YMR279CQ03263 540 aa1.58□□□□□ -2.16
SNC1YAL030W YDR248CQ03786 193 aa1.58□□□□□ -2.16
SNC1YAL030W GRH1Q04410 372 aaKnown RBP1.58□□□□□ -2.16
SNC1YAL030W YML096WQ04489 525 aa1.58□□□□□ -2.16
SNC1YAL030W YDR114CQ04597 100 aa1.58□□□□□ -2.16
SNC1YAL030W INM2Q05533 292 aa1.58□□□□□ -2.16
SNC1YAL030W YLR030WQ07967 263 aa1.58□□□□□ -2.16
SNC1YAL030W MSA1Q08471 629 aa1.58□□□□□ -2.16
SNC1YAL030W IES4Q08561 116 aa1.58□□□□□ -2.16
SNC1YAL030W AGC1Q12482 902 aa1.58□□□□□ -2.16
SNC1YAL030W YOR020W-AQ3E824 90 aa1.58□□□□□ -2.16
SNC1YAL030W HTL1Q9URQ5 78 aa1.58□□□□□ -2.16
SNC1YAL030W COX5AP00424 153 aa1.57□□□□□ -2.16
SNC1YAL030W CDC28P00546 298 aaKnown RBP1.57□□□□□ -2.16
SNC1YAL030W DBF2P22204 572 aa1.57□□□□□ -2.16
SNC1YAL030W TCA17P32613 152 aa1.57□□□□□ -2.16
SNC1YAL030W AGA2P32781 87 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms