RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 NCKAP1LP55160 1127 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 RESTQ13127 1097 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 UPP1Q16831 310 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 SEZ6Q53EL9 994 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 LILRA6Q6PI73 481 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 ALKAL1Q6UXT8 129 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 HAUS6Q7Z4H7 955 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 FBXL6Q8N531 539 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 LARP4BQ92615 738 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 ZNF707Q96C28 371 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 ASIC4Q96FT7 647 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 DDX27Q96GQ7 796 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 INTS4Q96HW7 963 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 CLSTN3Q9BQT9 956 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 RHOBTB2Q9BYZ6 727 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 ZHX3Q9H4I2 956 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 PARVGQ9HBI0 331 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 WDR6Q9NNW5 1121 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 BLOC1S4Q9NUP1 217 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 CNTN3Q9P232 1028 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 FBXW11Q9UKB1 542 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 I3L4J1 428 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 K7ELQ4 463 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 PODXLO00592 558 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 HNRNPDLO14979 420 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 ZMYND10O75800 440 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 FGFR3P22607 806 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 IGFBP6P24592 240 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 LIG4P49917 911 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 CEBPZQ03701 1054 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 MCL1Q07820 350 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 SPECC1Q5M775 1068 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 C3orf58Q8NDZ4 430 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 LRRC15Q8TF66 581 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 ZMAT2Q96NC0 199 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 PRKD2Q9BZL6 878 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 KCNH6Q9H252 994 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 NUB1Q9Y5A7 615 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 TECTAO75443 2155 aa16.4■□□□□ 0.22
CACNA1A-230ENST00000636768 SCP2P22307 547 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 TXLNAP40222 546 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 BRCC3P46736 316 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 PTPAQ15257 358 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 PPM1LQ5SGD2 360 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 FAM173BQ6P4H8 233 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 ANKS3Q6ZW76 656 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 C18orf25Q96B23 403 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 EPSTI1Q96J88 318 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 CCSER1Q9C0I3 900 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 SMOC2Q9H3U7 446 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 MTRRQ9UBK8 725 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 TBX20Q9UMR3 447 aa16.39■□□□□ 0.21
CACNA1A-230ENST00000636768 ADAM12O43184 909 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 TRAK2O60296 914 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 C8AP07357 584 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 CLTAP09496 248 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 CXCL8P10145 99 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 RPL9P32969 192 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 OR1D2P34982 312 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 ZNF131P52739 623 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 SLC10A6Q3KNW5 377 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 CD300LGQ6UXG3 332 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 GET4Q7L5D6 327 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 KRI1Q8N9T8 703 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 FBXO2Q9UK22 296 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 CDY1Q9Y6F8 540 aa16.38■□□□□ 0.21
CACNA1A-230ENST00000636768 MEFVO15553 781 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 N4BP1O75113 896 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 PAPLNO95428 1278 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 PDGFBP01127 241 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 HNRNPA1P09651 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 ABCD1P33897 745 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 MCM4P33991 863 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 DDIT3P35638 169 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 TDGQ13569 410 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 RAB33AQ14088 237 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 KYAT1Q16773 422 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 USP49Q70CQ1 688 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 SLC7A14Q8TBB6 771 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 PLEKHA5Q9HAU0 1116 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 KCNK12Q9HB15 430 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 STK17AQ9UEE5 414 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 POLIQ9UNA4 740 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 MTMR6Q9Y217 621 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 SRPRBQ9Y5M8 271 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 BACE2Q9Y5Z0 518 aa16.37■□□□□ 0.21
CACNA1A-230ENST00000636768 CCL16O15467 120 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 STX6O43752 255 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 XYLBO75191 536 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 PIGRP01833 764 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 HOXA9P31269 272 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 RRAGBQ5VZM2 374 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 KCNN1Q92952 543 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 KIF12Q96FN5 646 aa16.36■□□□□ 0.21
CACNA1A-230ENST00000636768 MYADMQ96S97 322 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms