RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 PHLDB3Q6NSJ2 640 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 MCPH1Q8NEM0 835 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 RASSF8Q8NHQ8 419 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 FGF14Q92915 247 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 PRIMPOLQ96LW4 560 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 HINFPQ9BQA5 517 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 FOXQ1Q9C009 403 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 FZD8Q9H461 694 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 PDZD7Q9H5P4 517 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 FBXW11Q9UKB1 542 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 PTGESO14684 152 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 ADAM12O43184 909 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 LRRN2O75325 713 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 PAPLNO95428 1278 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 MAPK6Q16659 721 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 C1orf210Q8IVY1 113 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 KIAA2013Q8IYS2 634 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 PIK3R5Q8WYR1 880 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 SHDQ96IW2 340 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 C2orf40Q9H1Z8 148 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 SEMA4AQ9H3S1 761 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 SLC2A4RGQ9NR83 387 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 CDH7Q9ULB5 785 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 DNM3Q9UQ16 869 aa17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 ZFP37Q9Y6Q3 630 aaPredicted RBP17.08■□□□□ 0.32
SNRNP48-203ENST00000634363 SLC26A4O43511 780 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 XYLBO75191 536 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 PRKCBP05771 671 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 HNRNPA1P09651 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 SP9P0CG40 484 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 OR1D2P34982 312 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 TXLNAP40222 546 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 ECM1Q16610 540 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 FAM187BQ17R55 369 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 CDCA2Q69YH5 1023 aaPredicted RBP17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 ATL3Q6DD88 541 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 ERMP1Q7Z2K6 904 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 DEPTORQ8TB45 409 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 ITFG1Q8TB96 612 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 SLC7A14Q8TBB6 771 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 BSNDQ8WZ55 320 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 FGF13Q92913 245 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 MMTAG2Q9BU76 263 aaKnown RBP17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 BHMT2Q9H2M3 363 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 HCFC1R1Q9NWW0 138 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 FBXO2Q9UK22 296 aaPredicted RBP17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 SRPRBQ9Y5M8 271 aaKnown RBP17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 MORC2Q9Y6X9 1032 aaPredicted RBP17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 SPTBN4Q9H254 2564 aa17.07■□□□□ 0.32
SNRNP48-203ENST00000634363 TRIP11Q15643 1979 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 ZMYM2Q9UBW7 1377 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 B3GAT3O94766 335 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 YEATS4O95619 227 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 IGFBP6P24592 240 aaPredicted RBP17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 GRIN1Q05586 938 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 ELAVL2Q12926 359 aaKnown RBP17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 HYIQ5T013 277 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 AXDND1Q5T1B0 1012 aaPredicted RBP17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 EEF1DP3Q658K8 133 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 ZC3H14Q6PJT7 736 aaKnown RBP17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 PADI6Q6TGC4 694 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 KCTD17Q8N5Z5 321 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 KRI1Q8N9T8 703 aaKnown RBP17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 PJA1Q8NG27 643 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 DLGAP2Q9P1A6 1054 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 CFAP45Q9UL16 551 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 VWA8A3KMH1 1905 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 MIA3Q5JRA6 1907 aa17.06■□□□□ 0.32
SNRNP48-203ENST00000634363 ACKR2O00590 384 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 SPTLC2O15270 562 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 GLULP15104 373 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 STARD6P59095 220 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 UBXN2BQ14CS0 331 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 NAB2Q15742 525 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 SLC44A4Q53GD3 710 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 PDXDC1Q6P996 788 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 MTSS1LQ765P7 747 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 ING5Q8WYH8 240 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 PLIN2Q99541 437 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 KXD1Q9BQD3 176 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 KIFC3Q9BVG8 833 aa17.05■□□□□ 0.32
SNRNP48-203ENST00000634363 KANSL1LA0AUZ9 987 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 E9PMD0 336 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 PPP6R2O75170 966 aa17.04■□□□□ 0.32
SNRNP48-203ENST00000634363 EDN1P05305 212 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms