RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 KRT17Q04695 432 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 NTRK3Q16288 839 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 TSSK1BQ9BXA7 367 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 IL25Q9H293 177 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 KCNF1Q9H3M0 494 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 PLEKHA5Q9HAU0 1116 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 SP110Q9HB58 689 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 SPECC1L-ADORA2AF8WAN1 911 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 PCSK1P29120 753 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 RECQLP46063 649 aaPredicted RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 SULT1E1P49888 294 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 TAF1CQ15572 869 aaPredicted RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 E4F1Q66K89 784 aaPredicted RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 C4orf50Q6ZRC1 276 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 NT5C1AQ9BXI3 368 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 PITPNM3Q9BZ71 974 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 RSAD1Q9HA92 442 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 PIN4Q9Y237 131 aaKnown RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 BCL9LQ86UU0 1499 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 SRGAP2O75044 1071 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 NPM3O75607 178 aaKnown RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 ACSL3O95573 720 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 HLA-DRAP01903 254 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 PYGBP11216 843 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 GALCP54803 685 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 GPS1Q13098 491 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 TAB3Q8N5C8 712 aaPredicted RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 PPHLN1Q8NEY8 458 aaKnown RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 KLHL29Q96CT2 875 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 ARHGEF26Q96DR7 871 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 EML4Q9HC35 981 aaKnown RBP9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 AGPAT3Q9NRZ7 376 aa9.38□□□□□ -0.91
AP000542.3-201ENST00000623391 PLSCR1O15162 318 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 GGCXP38435 758 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 FCGRTP55899 365 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 VGLL2Q8N8G2 317 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TMEM39BQ9GZU3 492 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 OLFML3Q9NRN5 406 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ZNF212Q9UDV6 495 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 AGAP1Q9UPQ3 857 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 GAKO14976 1311 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 NFAT5O94916 1531 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TXNDC9O14530 226 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CYP3A4P08684 503 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ITGA4P13612 1032 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ADORA2BP29275 332 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 HSPA9P38646 679 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 MAPRE2Q15555 327 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 HPS3Q969F9 1004 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 NUDT12Q9BQG2 462 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 AGO4Q9HCK5 861 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 SMYD2Q9NRG4 433 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 GMNCA6NCL1 334 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CFAP73A6NFT4 308 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 GYPCP04921 128 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 VIL1P09327 827 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 FNTAP49354 379 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ACTR2P61160 394 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ART3Q13508 389 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ACAD10Q6JQN1 1059 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 PXMP2Q9NR77 195 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 UBQLN1Q9UMX0 589 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 LMO7Q8WWI1 1683 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 COL14A1Q05707 1796 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 NCK2O43639 380 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 KLRK1P26718 216 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 NNMTP40261 264 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 EIF3EP60228 445 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 SKA2Q8WVK7 121 aaPredicted RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 RNF25Q96BH1 459 aaPredicted RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TAAR1Q96RJ0 339 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CGRRF1Q99675 332 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 PAK5Q9P286 719 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 GTF3C4Q9UKN8 822 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TPX2Q9ULW0 747 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 APOBEC2Q9Y235 224 aaKnown RBP9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 USP27XA6NNY8 438 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CES2O00748 559 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CXCL11O14625 94 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 SLC37A4O43826 429 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TGFB3P10600 412 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CDH6P55285 790 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TMEM119Q4V9L6 283 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TMEM143Q96AN5 459 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 TSPAN17Q96FV3 270 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 FHOD1Q9Y613 1164 aa9.37□□□□□ -0.91
AP000542.3-201ENST00000623391 CCL15-CCL14A0A0B4J2E2 113 aa9.36□□□□□ -0.91
AP000542.3-201ENST00000623391 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
AP000542.3-201ENST00000623391 GSTA4O15217 222 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms