RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 DDIT3P35638 169 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 SOX4Q06945 474 aaPredicted RBP22.44■■□□□ 1.18
SMC6-210ENST00000621152 MTMR3Q13615 1198 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 PTPAQ15257 358 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 SPECC1Q5M775 1068 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 PDXDC1Q6P996 788 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.44■■□□□ 1.18
SMC6-210ENST00000621152 UBALD2Q8IYN6 164 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 ZNF707Q96C28 371 aaPredicted RBP22.44■■□□□ 1.18
SMC6-210ENST00000621152 ASIC4Q96FT7 647 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 EPSTI1Q96J88 318 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 RHOBTB2Q9BYZ6 727 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 CCSER1Q9C0I3 900 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 ZHX3Q9H4I2 956 aa22.44■■□□□ 1.18
SMC6-210ENST00000621152 WDR6Q9NNW5 1121 aaKnown RBP22.44■■□□□ 1.18
SMC6-210ENST00000621152 I3L4J1 428 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 ADAM12O43184 909 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 BRCC3P46736 316 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 NCKAP1LP55160 1127 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 CEBPZQ03701 1054 aaKnown RBP22.43■■□□□ 1.18
SMC6-210ENST00000621152 RESTQ13127 1097 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 SLC10A6Q3KNW5 377 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 USP49Q70CQ1 688 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 SUGP1Q8IWZ8 645 aaKnown RBP22.43■■□□□ 1.18
SMC6-210ENST00000621152 FBXL6Q8N531 539 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 BICD1Q96G01 975 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 SNX27Q96L92 541 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 PRKD2Q9BZL6 878 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 ZDHHC7Q9NXF8 308 aa22.43■■□□□ 1.18
SMC6-210ENST00000621152 ZMYND10O75800 440 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 OR1D2P34982 312 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 NOLC1Q14978 699 aaKnown RBP eCLIP22.42■■□□□ 1.18
SMC6-210ENST00000621152 C3orf58Q8NDZ4 430 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 STAMQ92783 540 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 C18orf25Q96B23 403 aaPredicted RBP22.42■■□□□ 1.18
SMC6-210ENST00000621152 SMOC2Q9H3U7 446 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 PARVGQ9HBI0 331 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 CNTN3Q9P232 1028 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 TECTAO75443 2155 aa22.42■■□□□ 1.18
SMC6-210ENST00000621152 K7ELQ4 463 aaPredicted RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 PODXLO00592 558 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 MEFVO15553 781 aaPredicted RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 TRAK2O60296 914 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 TKTP29401 623 aaKnown RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 GBP2P32456 591 aaPredicted RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 RPL9P32969 192 aaKnown RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 MCL1Q07820 350 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 RAB33AQ14088 237 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 LARP4BQ92615 738 aaKnown RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 CLIC6Q96NY7 704 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 HAPLN2Q9GZV7 340 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 KCNH6Q9H252 994 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 CCDC39Q9UFE4 941 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 FBXO2Q9UK22 296 aaPredicted RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 TBX20Q9UMR3 447 aa22.41■■□□□ 1.18
SMC6-210ENST00000621152 SRPRBQ9Y5M8 271 aaKnown RBP22.41■■□□□ 1.18
SMC6-210ENST00000621152 PAPLNO95428 1278 aa22.4■■□□□ 1.18
SMC6-210ENST00000621152 LIG4P49917 911 aa22.4■■□□□ 1.18
SMC6-210ENST00000621152 ZNF131P52739 623 aa22.4■■□□□ 1.18
SMC6-210ENST00000621152 MTRRQ9UBK8 725 aa22.4■■□□□ 1.18
SMC6-210ENST00000621152 FBXW11Q9UKB1 542 aa22.4■■□□□ 1.18
SMC6-210ENST00000621152 MTMR6Q9Y217 621 aa22.4■■□□□ 1.18
SMC6-210ENST00000621152 PLXNA3P51805 1871 aa22.4■■□□□ 1.18
SMC6-210ENST00000621152 CLUHO75153 1309 aa22.39■■□□□ 1.18
SMC6-210ENST00000621152 MYO10Q9HD67 2058 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 K7ENM7 598 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 N4BP1O75113 896 aaKnown RBP22.39■■□□□ 1.17
SMC6-210ENST00000621152 CLTAP09496 248 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 PPM1LQ5SGD2 360 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 IER5LQ5T953 404 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 LIN9Q5TKA1 542 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 RSPO2Q6UXX9 243 aaPredicted RBP22.39■■□□□ 1.17
SMC6-210ENST00000621152 ANKS3Q6ZW76 656 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 KCNN1Q92952 543 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 KCNK12Q9HB15 430 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 NUB1Q9Y5A7 615 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 BACE2Q9Y5Z0 518 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 CDY1Q9Y6F8 540 aa22.39■■□□□ 1.17
SMC6-210ENST00000621152 STX6O43752 255 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 TBCAO75347 108 aaKnown RBP22.38■■□□□ 1.17
SMC6-210ENST00000621152 PDGFBP01127 241 aaPredicted RBP22.38■■□□□ 1.17
SMC6-210ENST00000621152 C8AP07357 584 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 SCP2P22307 547 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 NMT1P30419 496 aaKnown RBP22.38■■□□□ 1.17
SMC6-210ENST00000621152 SPAG1Q07617 926 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 TDGQ13569 410 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 AXDND1Q5T1B0 1012 aaPredicted RBP22.38■■□□□ 1.17
SMC6-210ENST00000621152 RRAGBQ5VZM2 374 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 KRI1Q8N9T8 703 aaKnown RBP22.38■■□□□ 1.17
SMC6-210ENST00000621152 MYADMQ96S97 322 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 ZSCAN16Q9H4T2 348 aaPredicted RBP22.38■■□□□ 1.17
SMC6-210ENST00000621152 PLEKHA5Q9HAU0 1116 aa22.38■■□□□ 1.17
SMC6-210ENST00000621152 HNRNPDLO14979 420 aaKnown RBP22.37■■□□□ 1.17
SMC6-210ENST00000621152 HNRNPA1P09651 372 aaKnown RBP eCLIP22.37■■□□□ 1.17
SMC6-210ENST00000621152 CXCL8P10145 99 aa22.37■■□□□ 1.17
SMC6-210ENST00000621152 AVPR2P30518 371 aa22.37■■□□□ 1.17
SMC6-210ENST00000621152 UVSSAQ2YD98 709 aa22.37■■□□□ 1.17
SMC6-210ENST00000621152 DYMQ7RTS9 669 aa22.37■■□□□ 1.17
SMC6-210ENST00000621152 GRASPQ7Z6J2 395 aaPredicted RBP22.37■■□□□ 1.17
SMC6-210ENST00000621152 USP28Q96RU2 1077 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms