RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ARSHQ5FYA8 562 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 KCNN1Q92952 543 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 DDX27Q96GQ7 796 aaKnown RBP24.87■■□□□ 1.57
FAM228B-208ENST00000613899 INTS4Q96HW7 963 aaKnown RBP24.87■■□□□ 1.57
FAM228B-208ENST00000613899 CLSTN3Q9BQT9 956 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 REEP2Q9BRK0 252 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 PIDD1Q9HB75 910 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 GOLGA2P5Q9HBQ8 144 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 CNTN3Q9P232 1028 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 FBXW11Q9UKB1 542 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 ZDBF2Q9HCK1 2354 aa24.87■■□□□ 1.57
FAM228B-208ENST00000613899 KMT2EQ8IZD2 1858 aa24.86■■□□□ 1.57
FAM228B-208ENST00000613899 KCNE1P15382 129 aa24.86■■□□□ 1.57
FAM228B-208ENST00000613899 FGFR3P22607 806 aa24.86■■□□□ 1.57
FAM228B-208ENST00000613899 GRIN1Q05586 938 aa24.86■■□□□ 1.57
FAM228B-208ENST00000613899 KARSQ15046 597 aaKnown RBP24.86■■□□□ 1.57
FAM228B-208ENST00000613899 LIN9Q5TKA1 542 aa24.86■■□□□ 1.57
FAM228B-208ENST00000613899 ZNF707Q96C28 371 aaPredicted RBP24.86■■□□□ 1.57
FAM228B-208ENST00000613899 BICD1Q96G01 975 aa24.86■■□□□ 1.57
FAM228B-208ENST00000613899 BLOC1S4Q9NUP1 217 aa24.86■■□□□ 1.57
FAM228B-208ENST00000613899 CLDN3O15551 220 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 ZMYND10O75800 440 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 FAM13AO94988 1023 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 SOX4Q06945 474 aaPredicted RBP24.85■■□□□ 1.57
FAM228B-208ENST00000613899 MCL1Q07820 350 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 DHX8Q14562 1220 aaKnown RBP24.85■■□□□ 1.57
FAM228B-208ENST00000613899 HAUS6Q7Z4H7 955 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 RAD54LQ92698 747 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 ZBTB45Q96K62 511 aaPredicted RBP24.85■■□□□ 1.57
FAM228B-208ENST00000613899 PRKD2Q9BZL6 878 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 CCSER1Q9C0I3 900 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 PARVGQ9HBI0 331 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 MTRRQ9UBK8 725 aa24.85■■□□□ 1.57
FAM228B-208ENST00000613899 PODXLO00592 558 aa24.84■■□□□ 1.57
FAM228B-208ENST00000613899 KRT18P05783 430 aaKnown RBP24.84■■□□□ 1.57
FAM228B-208ENST00000613899 SYT1P21579 422 aa24.84■■□□□ 1.57
FAM228B-208ENST00000613899 MATR3P43243 847 aaKnown RBP eCLIP24.84■■□□□ 1.57
FAM228B-208ENST00000613899 ZNF131P52739 623 aa24.84■■□□□ 1.57
FAM228B-208ENST00000613899 MCM6Q14566 821 aa24.84■■□□□ 1.57
FAM228B-208ENST00000613899 C3orf58Q8NDZ4 430 aa24.84■■□□□ 1.57
FAM228B-208ENST00000613899 LRRC15Q8TF66 581 aa24.84■■□□□ 1.57
FAM228B-208ENST00000613899 LARP4BQ92615 738 aaKnown RBP24.84■■□□□ 1.57
FAM228B-208ENST00000613899 ZMAT2Q96NC0 199 aaKnown RBP24.84■■□□□ 1.57
FAM228B-208ENST00000613899 PRRX2Q99811 253 aa24.84■■□□□ 1.57
FAM228B-208ENST00000613899 K7ENM7 598 aa24.83■■□□□ 1.57
FAM228B-208ENST00000613899 TBCAO75347 108 aaKnown RBP24.83■■□□□ 1.57
FAM228B-208ENST00000613899 HNRNPA1P09651 372 aaKnown RBP eCLIP24.83■■□□□ 1.57
FAM228B-208ENST00000613899 GBP2P32456 591 aaPredicted RBP24.83■■□□□ 1.57
FAM228B-208ENST00000613899 ABCD1P33897 745 aa24.83■■□□□ 1.57
FAM228B-208ENST00000613899 RESTQ13127 1097 aa24.83■■□□□ 1.57
FAM228B-208ENST00000613899 ANKS3Q6ZW76 656 aa24.83■■□□□ 1.57
FAM228B-208ENST00000613899 MYCT1Q8N699 235 aa24.83■■□□□ 1.57
FAM228B-208ENST00000613899 CLIC4Q9Y696 253 aa24.83■■□□□ 1.57
FAM228B-208ENST00000613899 DOCK8Q8NF50 2099 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 K7ELQ4 463 aaPredicted RBP24.82■■□□□ 1.56
FAM228B-208ENST00000613899 HNRNPDLO14979 420 aaKnown RBP24.82■■□□□ 1.56
FAM228B-208ENST00000613899 C8AP07357 584 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 TKTP29401 623 aaKnown RBP24.82■■□□□ 1.56
FAM228B-208ENST00000613899 HOXA9P31269 272 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 RPL9P32969 192 aaKnown RBP24.82■■□□□ 1.56
FAM228B-208ENST00000613899 LIG4P49917 911 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 RAB33AQ14088 237 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 PTPAQ15257 358 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 PPM1LQ5SGD2 360 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 CD300LGQ6UXG3 332 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 IGSF9Q9P2J2 1179 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.82■■□□□ 1.56
FAM228B-208ENST00000613899 BACE2Q9Y5Z0 518 aa24.82■■□□□ 1.56
FAM228B-208ENST00000613899 N4BP1O75113 896 aaKnown RBP24.81■■□□□ 1.56
FAM228B-208ENST00000613899 OR1D2P34982 312 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 BRCC3P46736 316 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 TDGQ13569 410 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 KYAT1Q16773 422 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 SLC10A6Q3KNW5 377 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 SMOC2Q9H3U7 446 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 ZHX3Q9H4I2 956 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 PLEKHA5Q9HAU0 1116 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 KCNK12Q9HB15 430 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.81■■□□□ 1.56
FAM228B-208ENST00000613899 EPS15L1Q9UBC2 864 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 STK17AQ9UEE5 414 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 CCDC39Q9UFE4 941 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 TBX20Q9UMR3 447 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 NUB1Q9Y5A7 615 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 CDY1Q9Y6F8 540 aa24.81■■□□□ 1.56
FAM228B-208ENST00000613899 I3L4J1 428 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 SYN3O14994 580 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 ADAM12O43184 909 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 TRAK2O60296 914 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 PIGRP01833 764 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 CLTAP09496 248 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 IGFBP6P24592 240 aaPredicted RBP24.8■■□□□ 1.56
FAM228B-208ENST00000613899 MARCKSP29966 332 aaPredicted RBP24.8■■□□□ 1.56
FAM228B-208ENST00000613899 TXLNAP40222 546 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 SEZ6Q53EL9 994 aa24.8■■□□□ 1.56
FAM228B-208ENST00000613899 C18orf25Q96B23 403 aaPredicted RBP24.8■■□□□ 1.56
FAM228B-208ENST00000613899 FBXO2Q9UK22 296 aaPredicted RBP24.8■■□□□ 1.56
FAM228B-208ENST00000613899 SRPRBQ9Y5M8 271 aaKnown RBP24.8■■□□□ 1.56
FAM228B-208ENST00000613899 MEFVO15553 781 aaPredicted RBP24.79■■□□□ 1.56
FAM228B-208ENST00000613899 XYLBO75191 536 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms