RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 DDX56Q9NY93 547 aaKnown RBP21.22■□□□□ 0.99
COL15A1-205ENST00000610452 IGBP1P78318 339 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 TTC8Q8TAM2 541 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 ZNF184Q99676 751 aaPredicted RBP21.22■□□□□ 0.99
COL15A1-205ENST00000610452 EXOSC4Q9NPD3 245 aaKnown RBP21.22■□□□□ 0.99
COL15A1-205ENST00000610452 OSBPP22059 807 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 EAPPQ56P03 285 aaPredicted RBP21.22■□□□□ 0.99
COL15A1-205ENST00000610452 TSHZ1Q6ZSZ6 1077 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 PCMTD2Q9NV79 361 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 KLHL8Q9P2G9 620 aaPredicted RBP21.22■□□□□ 0.99
COL15A1-205ENST00000610452 MFN2O95140 757 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 KRT7P08729 469 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 TRIM49P0CI25 452 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 TRIM49CP0CI26 452 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 TFAMQ00059 246 aaKnown RBP21.22■□□□□ 0.99
COL15A1-205ENST00000610452 CHI3L2Q15782 390 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 EFHC1Q5JVL4 640 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 JADE3Q92613 823 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 RNPEPL1Q9HAU8 725 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 COMMD3-BMI1R4GMX3 469 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 TSPAN9O75954 239 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 GJA8P48165 433 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 ARHGEF16Q5VV41 709 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 METTL13Q8N6R0 699 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 RUBCNLQ9H714 662 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 ATXN10Q9UBB4 475 aa21.22■□□□□ 0.99
COL15A1-205ENST00000610452 RTN2O75298 545 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 PFKFB3Q16875 520 aaPredicted RBP21.21■□□□□ 0.99
COL15A1-205ENST00000610452 IFNEQ86WN2 208 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 LRRC6Q86X45 466 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 DDIASQ8IXT1 998 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 DKK3Q9UBP4 350 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 TAF4O00268 1085 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 TNFAIP8O95379 198 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 SLC1A1P43005 524 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 NUDT2P50583 147 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 UBE2SQ16763 222 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 NAALADL2Q58DX5 795 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 PCYOX1LQ8NBM8 494 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 SLC9A2Q9UBY0 812 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 RABGEF1Q9UJ41 708 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 R3HDM2Q9Y2K5 976 aaKnown RBP21.21■□□□□ 0.99
COL15A1-205ENST00000610452 A8MXQ7 604 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 TRAPPC3O43617 180 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 BCL10O95999 233 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 GRK2P25098 689 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 KCNJ1P48048 391 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 CCNHP51946 323 aaPredicted RBP21.21■□□□□ 0.99
COL15A1-205ENST00000610452 KCNA1Q09470 495 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 MKRN4PQ13434 485 aaPredicted RBP21.21■□□□□ 0.99
COL15A1-205ENST00000610452 CCDC81Q6ZN84 652 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 MROH7-TTC4A0A0A0MT08 1334 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 PDS5AQ29RF7 1337 aaKnown RBP21.21■□□□□ 0.99
COL15A1-205ENST00000610452 USP1O94782 785 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 MECOMQ03112 1051 aa21.21■□□□□ 0.99
COL15A1-205ENST00000610452 SMAD1Q15797 465 aaKnown RBP21.21■□□□□ 0.99
COL15A1-205ENST00000610452 EML4Q9HC35 981 aaKnown RBP21.21■□□□□ 0.99
COL15A1-205ENST00000610452 DYNLL1P63167 89 aaKnown RBP21.2■□□□□ 0.98
COL15A1-205ENST00000610452 GLMNQ92990 594 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 LY9Q9HBG7 655 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 CYP39A1Q9NYL5 469 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 SMAPO00193 183 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 HNRNPRO43390 633 aaKnown RBP21.2■□□□□ 0.98
COL15A1-205ENST00000610452 KBTBD12Q3ZCT8 623 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 FRMD5Q7Z6J6 570 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 ASNSD1Q9NWL6 643 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 GLI1P08151 1106 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 KLK7P49862 253 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 GOLPH3Q9H4A6 298 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 GGA2Q9UJY4 613 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 DUSP10Q9Y6W6 482 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 AP3B1O00203 1094 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 LSM1O15116 133 aaKnown RBP21.2■□□□□ 0.98
COL15A1-205ENST00000610452 EPHB2P29323 1055 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 ABCE1P61221 599 aaKnown RBP21.2■□□□□ 0.98
COL15A1-205ENST00000610452 TJAP1Q5JTD0 557 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 TRAPPC3LQ5T215 181 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 C3orf62Q6ZUJ4 267 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 BBS5Q8N3I7 341 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 CAPN6Q9Y6Q1 641 aa21.2■□□□□ 0.98
COL15A1-205ENST00000610452 CIITAP33076 1130 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 CDH24Q86UP0 819 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 ZCCHC7Q8N3Z6 543 aaKnown RBP21.19■□□□□ 0.98
COL15A1-205ENST00000610452 PCSK1NQ9UHG2 260 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 TAGLN3Q9UI15 199 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 NEDD4P46934 1319 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 ZNF233A6NK53 670 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 TBKBP1A7MCY6 615 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 POTECB2RU33 542 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 TSC22D2O75157 780 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 SLC4A1P02730 911 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 KRT76Q01546 638 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 XXYLT1Q8NBI6 393 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 AENQ8WTP8 325 aaKnown RBP21.19■□□□□ 0.98
COL15A1-205ENST00000610452 KANSL2Q9H9L4 492 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 ZNF212Q9UDV6 495 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 ATP7BP35670 1465 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 SNRPAP09012 282 aaKnown RBP21.19■□□□□ 0.98
COL15A1-205ENST00000610452 WEE2P0C1S8 567 aa21.19■□□□□ 0.98
COL15A1-205ENST00000610452 MYL2P10916 166 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms