RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 CCDC77Q9BR77 488 aa16.26■□□□□ 0.19
LYSMD4-211ENST00000604213 PHTF1Q9UMS5 762 aa16.26■□□□□ 0.19
LYSMD4-211ENST00000604213 ATP4AP20648 1035 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 LMNB2Q03252 620 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 DNAJC3Q13217 504 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 TMED2Q15363 201 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 LONP2Q86WA8 852 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 ZSWIM2Q8NEG5 633 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 ATL2Q8NHH9 583 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 MAIP1Q8WWC4 291 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 SHC3Q92529 594 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 C9orf72Q96LT7 481 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 CBWD1Q9BRT8 395 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 TBC1D10AQ9BXI6 508 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 TMEM117Q9H0C3 514 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 LRRC4BQ9NT99 713 aa16.25■□□□□ 0.19
LYSMD4-211ENST00000604213 DPPA5A6NC42 116 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 FAM196BA6NMK8 535 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 CYP11B1P15538 503 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 ATP6V1C1P21283 382 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 RRM1P23921 792 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 CDR2Q01850 454 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 NFIAQ12857 509 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 RBM26Q5T8P6 1007 aaKnown RBP16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 RGS9BPQ6ZS82 235 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 NUDCD1Q96RS6 583 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 SUGT1Q9Y2Z0 365 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 F5H6K3 240 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 K7ENM7 598 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 SPAG7O75391 227 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 UPP2O95045 317 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 MUTP22033 750 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 INHBEP58166 350 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 CRY2Q49AN0 593 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 WASHC2DQ5SRD0 308 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 ACAD10Q6JQN1 1059 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 TRABD2AQ86V40 505 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 PPM1KQ8N3J5 372 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 RIBC1Q8N443 379 aaPredicted RBP16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 ASAP3Q8TDY4 903 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 TMEM174Q8WUU8 243 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 SLCO1B3Q9NPD5 702 aa16.24■□□□□ 0.19
LYSMD4-211ENST00000604213 PMM2O15305 246 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 TOM1O60784 492 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 ABHD2P08910 425 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 GCAP28676 217 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 CTCFP49711 727 aaPredicted RBP16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 MXI1P50539 228 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 SCNN1DP51172 638 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 CEP120Q8N960 986 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 CERKQ8TCT0 537 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 DDX1Q92499 740 aaKnown RBP16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 SEMA4DQ92854 862 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 SH3GL3Q99963 347 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 GRID1Q9ULK0 1009 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 A0A1W2PRG0 241 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 PRPF4O43172 522 aaKnown RBP eCLIP16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 DCTN3O75935 186 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 MAPK4P31152 587 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 MFAP3P55082 362 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 IZUMO3Q5VZ72 239 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 ANAPC7Q9UJX3 599 aa16.23■□□□□ 0.19
LYSMD4-211ENST00000604213 ARHGEF35A5YM69 484 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 TRAFD1O14545 582 aaPredicted RBP16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 GAS7O60861 476 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 EDF1O60869 148 aaKnown RBP16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 NDUFB10O96000 172 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 EPHB2P29323 1055 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 PCK1P35558 622 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 MAGEA4P43358 317 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 CENPCQ03188 943 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 IKQ13123 557 aaPredicted RBP16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 SPARCL1Q14515 664 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 CERKLQ49MI3 558 aaPredicted RBP16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 APOBEC3HQ6NTF7 200 aaKnown RBP16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 XXYLT1Q8NBI6 393 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 BBOF1Q8ND07 529 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 SH3TC2Q8TF17 1288 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 C10orf82Q8WW14 230 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 DDX27Q96GQ7 796 aaKnown RBP16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 GMCL1Q96IK5 515 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 UNC45AQ9H3U1 944 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 TMEM206Q9H813 350 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 UBN1Q9NPG3 1134 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 STRCQ7RTU9 1775 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 MYH11P35749 1972 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 ATRNL1Q5VV63 1379 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 ABLIM1O14639 778 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 FESP07332 822 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 ALDH3A1P30838 453 aa16.22■□□□□ 0.19
LYSMD4-211ENST00000604213 SARNPP82979 210 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms