RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 K7ELQ4 463 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-205ENST00000598159 FAM13AO94988 1023 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 FGFR3P22607 806 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 RESTQ13127 1097 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 MTMR3Q13615 1198 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 NOLC1Q14978 699 aaKnown RBP eCLIP25.17■■□□□ 1.62
SSBP4-205ENST00000598159 MYCT1Q8N699 235 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 LRRC15Q8TF66 581 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 SNX27Q96L92 541 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 PARVGQ9HBI0 331 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 WDR6Q9NNW5 1121 aaKnown RBP25.17■■□□□ 1.62
SSBP4-205ENST00000598159 CNTN3Q9P232 1028 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 CCDC39Q9UFE4 941 aa25.17■■□□□ 1.62
SSBP4-205ENST00000598159 SRPRBQ9Y5M8 271 aaKnown RBP25.17■■□□□ 1.62
SSBP4-205ENST00000598159 RFPL2O75678 378 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 KRT18P05783 430 aaKnown RBP25.16■■□□□ 1.62
SSBP4-205ENST00000598159 MYBP10242 640 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 RPL9P32969 192 aaKnown RBP25.16■■□□□ 1.62
SSBP4-205ENST00000598159 ZNF131P52739 623 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 MCL1Q07820 350 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 CD300LGQ6UXG3 332 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 SMG7Q92540 1137 aaKnown RBP25.16■■□□□ 1.62
SSBP4-205ENST00000598159 LARP4BQ92615 738 aaKnown RBP25.16■■□□□ 1.62
SSBP4-205ENST00000598159 STAMQ92783 540 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 ASIC4Q96FT7 647 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 ZMAT2Q96NC0 199 aaKnown RBP25.16■■□□□ 1.62
SSBP4-205ENST00000598159 PRKD2Q9BZL6 878 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 ZSCAN16Q9H4T2 348 aaPredicted RBP25.16■■□□□ 1.62
SSBP4-205ENST00000598159 PIDD1Q9HB75 910 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 GOLGA2P5Q9HBQ8 144 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 ANKFY1Q9P2R3 1169 aa25.16■■□□□ 1.62
SSBP4-205ENST00000598159 DENND4AQ7Z401 1863 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 TRAK2O60296 914 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 ZMYND10O75800 440 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 HARSP12081 509 aaKnown RBP25.15■■□□□ 1.62
SSBP4-205ENST00000598159 MARCKSP29966 332 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-205ENST00000598159 ABCD1P33897 745 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 MATR3P43243 847 aaKnown RBP eCLIP25.15■■□□□ 1.62
SSBP4-205ENST00000598159 SOX4Q06945 474 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-205ENST00000598159 BICD1Q96G01 975 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 EPSTI1Q96J88 318 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 PLEKHA5Q9HAU0 1116 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 TBX20Q9UMR3 447 aa25.15■■□□□ 1.62
SSBP4-205ENST00000598159 KYAT1Q16773 422 aa25.14■■□□□ 1.62
SSBP4-205ENST00000598159 SLC10A6Q3KNW5 377 aa25.14■■□□□ 1.62
SSBP4-205ENST00000598159 ANKS3Q6ZW76 656 aa25.14■■□□□ 1.62
SSBP4-205ENST00000598159 ZNF707Q96C28 371 aaPredicted RBP25.14■■□□□ 1.62
SSBP4-205ENST00000598159 FBXO2Q9UK22 296 aaPredicted RBP25.14■■□□□ 1.62
SSBP4-205ENST00000598159 FBXW11Q9UKB1 542 aa25.14■■□□□ 1.62
SSBP4-205ENST00000598159 MTMR6Q9Y217 621 aa25.14■■□□□ 1.62
SSBP4-205ENST00000598159 VWA8A3KMH1 1905 aa25.14■■□□□ 1.61
SSBP4-205ENST00000598159 PODXLO00592 558 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 CLTAP09496 248 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 IGFBP6P24592 240 aaPredicted RBP25.13■■□□□ 1.61
SSBP4-205ENST00000598159 LIG4P49917 911 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 RAB33AQ14088 237 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 SPECC1Q5M775 1068 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 FAM173BQ6P4H8 233 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 SUGP1Q8IWZ8 645 aaKnown RBP25.13■■□□□ 1.61
SSBP4-205ENST00000598159 FBXL6Q8N531 539 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 ZHX3Q9H4I2 956 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 FOXD4L1Q9NU39 408 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 MTRRQ9UBK8 725 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 STK17AQ9UEE5 414 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 BACE2Q9Y5Z0 518 aa25.13■■□□□ 1.61
SSBP4-205ENST00000598159 MORC2Q9Y6X9 1032 aaPredicted RBP25.13■■□□□ 1.61
SSBP4-205ENST00000598159 STX6O43752 255 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 TBCAO75347 108 aaKnown RBP25.12■■□□□ 1.61
SSBP4-205ENST00000598159 PIGRP01833 764 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 ASGR2P07307 311 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 OR1D2P34982 312 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 BRCC3P46736 316 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 UVSSAQ2YD98 709 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 SEZ6Q53EL9 994 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 USP49Q70CQ1 688 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 RTL10Q7L3V2 364 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 KRI1Q8N9T8 703 aaKnown RBP25.12■■□□□ 1.61
SSBP4-205ENST00000598159 C3orf58Q8NDZ4 430 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 SNX21Q969T3 373 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.12■■□□□ 1.61
SSBP4-205ENST00000598159 CLUHO75153 1309 aa25.12■■□□□ 1.61
SSBP4-205ENST00000598159 K7ENM7 598 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 MEFVO15553 781 aaPredicted RBP25.11■■□□□ 1.61
SSBP4-205ENST00000598159 HNRNPA1P09651 372 aaKnown RBP eCLIP25.11■■□□□ 1.61
SSBP4-205ENST00000598159 TXLNAP40222 546 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 GTF2BQ00403 316 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 CEBPZQ03701 1054 aaKnown RBP25.11■■□□□ 1.61
SSBP4-205ENST00000598159 SLC39A14Q15043 492 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 LIN9Q5TKA1 542 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 RRAGBQ5VZM2 374 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 HAPLN2Q9GZV7 340 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.11■■□□□ 1.619e-7■■■■□ 19.7
SSBP4-205ENST00000598159 IGSF9Q9P2J2 1179 aa25.11■■□□□ 1.61
SSBP4-205ENST00000598159 TRIOO75962 3097 aa25.1■■□□□ 1.61
SSBP4-205ENST00000598159 SYN3O14994 580 aa25.1■■□□□ 1.61
SSBP4-205ENST00000598159 ADAM12O43184 909 aa25.1■■□□□ 1.61
SSBP4-205ENST00000598159 TKTP29401 623 aaKnown RBP25.1■■□□□ 1.61
SSBP4-205ENST00000598159 HOXA9P31269 272 aa25.1■■□□□ 1.61
SSBP4-205ENST00000598159 GBP2P32456 591 aaPredicted RBP25.1■■□□□ 1.61
SSBP4-205ENST00000598159 PPM1LQ5SGD2 360 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms