RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PAPLNO95428 1278 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 KCNE1P15382 129 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 FGFR3P22607 806 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 NCKAP1LP55160 1127 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 SOX4Q06945 474 aaPredicted RBP25.68■■□□□ 1.7
LSM4-204ENST00000594828 MCM6Q14566 821 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 NOLC1Q14978 699 aaKnown RBP eCLIP25.68■■□□□ 1.7
LSM4-204ENST00000594828 CD300LGQ6UXG3 332 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 FBXL6Q8N531 539 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 MYCT1Q8N699 235 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 RAD54LQ92698 747 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 STAMQ92783 540 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 ZNF707Q96C28 371 aaPredicted RBP25.68■■□□□ 1.7
LSM4-204ENST00000594828 CCSER1Q9C0I3 900 aa25.68■■□□□ 1.7
LSM4-204ENST00000594828 MYH11P35749 1972 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 ZMYND10O75800 440 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 FAM13AO94988 1023 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 KRT18P05783 430 aaKnown RBP25.67■■□□□ 1.7
LSM4-204ENST00000594828 MATR3P43243 847 aaKnown RBP eCLIP25.67■■□□□ 1.7
LSM4-204ENST00000594828 PTPAQ15257 358 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 DENND4AQ7Z401 1863 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 BICD1Q96G01 975 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 PRKD2Q9BZL6 878 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 CNTN3Q9P232 1028 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 TRIP11Q15643 1979 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 C2orf16Q68DN1 1984 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 TRIOO75962 3097 aa25.67■■□□□ 1.7
LSM4-204ENST00000594828 MARCKSP29966 332 aaPredicted RBP25.66■■□□□ 1.7
LSM4-204ENST00000594828 DDIT3P35638 169 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 MCL1Q07820 350 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 RESTQ13127 1097 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 SEZ6Q53EL9 994 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 C3orf58Q8NDZ4 430 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 LARP4BQ92615 738 aaKnown RBP25.66■■□□□ 1.7
LSM4-204ENST00000594828 PARVGQ9HBI0 331 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 FBXW11Q9UKB1 542 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 MYO10Q9HD67 2058 aa25.66■■□□□ 1.7
LSM4-204ENST00000594828 MTCL1Q9Y4B5 1905 aaKnown RBP25.66■■□□□ 1.7
LSM4-204ENST00000594828 CLUHO75153 1309 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 PODXLO00592 558 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 ADAM12O43184 909 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 SCP2P22307 547 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 GBP2P32456 591 aaPredicted RBP25.65■■□□□ 1.7
LSM4-204ENST00000594828 BRCC3P46736 316 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 ZNF131P52739 623 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 SLC10A6Q3KNW5 377 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 SPECC1Q5M775 1068 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 FAM173BQ6P4H8 233 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 KCNN1Q92952 543 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 EPSTI1Q96J88 318 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 SMOC2Q9H3U7 446 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 ZHX3Q9H4I2 956 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 FOXD4L1Q9NU39 408 aa25.65■■□□□ 1.7
LSM4-204ENST00000594828 I3L4J1 428 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 K7ELQ4 463 aaPredicted RBP25.64■■□□□ 1.7
LSM4-204ENST00000594828 MEFVO15553 781 aaPredicted RBP25.64■■□□□ 1.7
LSM4-204ENST00000594828 TRAK2O60296 914 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 TKTP29401 623 aaKnown RBP25.64■■□□□ 1.7
LSM4-204ENST00000594828 RPL9P32969 192 aaKnown RBP25.64■■□□□ 1.7
LSM4-204ENST00000594828 OR1D2P34982 312 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 RAB33AQ14088 237 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 LIN9Q5TKA1 542 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 USP49Q70CQ1 688 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 C18orf25Q96B23 403 aaPredicted RBP25.64■■□□□ 1.7
LSM4-204ENST00000594828 MTRRQ9UBK8 725 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 TBX20Q9UMR3 447 aa25.64■■□□□ 1.7
LSM4-204ENST00000594828 SRPRBQ9Y5M8 271 aaKnown RBP25.64■■□□□ 1.7
LSM4-204ENST00000594828 K7ENM7 598 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 N4BP1O75113 896 aaKnown RBP25.63■■□□□ 1.69
LSM4-204ENST00000594828 LIG4P49917 911 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 CEBPZQ03701 1054 aaKnown RBP25.63■■□□□ 1.69
LSM4-204ENST00000594828 PPM1LQ5SGD2 360 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 ANKS3Q6ZW76 656 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 HAPLN2Q9GZV7 340 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 KCNK12Q9HB15 430 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 CCDC39Q9UFE4 941 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 FBXO2Q9UK22 296 aaPredicted RBP25.63■■□□□ 1.69
LSM4-204ENST00000594828 NUB1Q9Y5A7 615 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 BACE2Q9Y5Z0 518 aa25.63■■□□□ 1.69
LSM4-204ENST00000594828 TBCAO75347 108 aaKnown RBP25.62■■□□□ 1.69
LSM4-204ENST00000594828 C8AP07357 584 aa25.62■■□□□ 1.69
LSM4-204ENST00000594828 CLTAP09496 248 aa25.62■■□□□ 1.69
LSM4-204ENST00000594828 HNRNPA1P09651 372 aaKnown RBP eCLIP25.62■■□□□ 1.69
LSM4-204ENST00000594828 TDGQ13569 410 aa25.62■■□□□ 1.69
LSM4-204ENST00000594828 PLEKHA5Q9HAU0 1116 aa25.62■■□□□ 1.69
LSM4-204ENST00000594828 IGSF9Q9P2J2 1179 aa25.62■■□□□ 1.69
LSM4-204ENST00000594828 MTMR6Q9Y217 621 aa25.62■■□□□ 1.69
LSM4-204ENST00000594828 CDY1Q9Y6F8 540 aa25.62■■□□□ 1.69
LSM4-204ENST00000594828 VWA8A3KMH1 1905 aa25.61■■□□□ 1.69
LSM4-204ENST00000594828 HNRNPDLO14979 420 aaKnown RBP25.61■■□□□ 1.69
LSM4-204ENST00000594828 PDGFBP01127 241 aaPredicted RBP25.61■■□□□ 1.69
LSM4-204ENST00000594828 KYAT1Q16773 422 aa25.61■■□□□ 1.69
LSM4-204ENST00000594828 IER5LQ5T953 404 aa25.61■■□□□ 1.69
LSM4-204ENST00000594828 RSPO2Q6UXX9 243 aaPredicted RBP25.61■■□□□ 1.69
LSM4-204ENST00000594828 KRI1Q8N9T8 703 aaKnown RBP25.61■■□□□ 1.69
LSM4-204ENST00000594828 CLIC6Q96NY7 704 aa25.61■■□□□ 1.69
LSM4-204ENST00000594828 MYADMQ96S97 322 aa25.61■■□□□ 1.69
LSM4-204ENST00000594828 ZSCAN16Q9H4T2 348 aaPredicted RBP25.61■■□□□ 1.69
LSM4-204ENST00000594828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.61■■□□□ 1.69
LSM4-204ENST00000594828 EPS15L1Q9UBC2 864 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms