RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 ADAM12O43184 909 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 FAM13AO94988 1023 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 KRT18P05783 430 aaKnown RBP14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 FGFR3P22607 806 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 MARCKSP29966 332 aaPredicted RBP14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 NCKAP1LP55160 1127 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 PTPAQ15257 358 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 SEZ6Q53EL9 994 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 FAM173BQ6P4H8 233 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 PDXDC1Q6P996 788 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 ZPBP2Q6X784 338 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 HAUS6Q7Z4H7 955 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 UBALD2Q8IYN6 164 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 FBXL6Q8N531 539 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 C3orf58Q8NDZ4 430 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 RAD54LQ92698 747 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 BICD1Q96G01 975 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 DDX27Q96GQ7 796 aaKnown RBP14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 RHOBTB2Q9BYZ6 727 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 PRKD2Q9BZL6 878 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 ZDHHC7Q9NXF8 308 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 FBXW11Q9UKB1 542 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 TDRD15B5MCY1 1934 aaKnown RBP14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 CLUHO75153 1309 aa14.32□□□□□ -0.12
PRKCSH-218ENST00000593053 PODXLO00592 558 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 TRAPPC3O43617 180 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 N4BP1O75113 896 aaKnown RBP14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 ZMYND10O75800 440 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 KCNE1P15382 129 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 TKTP29401 623 aaKnown RBP14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 GBP2P32456 591 aaPredicted RBP14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 BRCC3P46736 316 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 CEBPZQ03701 1054 aaKnown RBP14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 MCL1Q07820 350 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 SLC10A6Q3KNW5 377 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 LIN9Q5TKA1 542 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 USP49Q70CQ1 688 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 MYCT1Q8N699 235 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 STAMQ92783 540 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 C18orf25Q96B23 403 aaPredicted RBP14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 INTS4Q96HW7 963 aaKnown RBP14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 EPSTI1Q96J88 318 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 CNTN3Q9P232 1028 aa14.31□□□□□ -0.12
PRKCSH-218ENST00000593053 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 K7ENM7 598 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 TBCAO75347 108 aaKnown RBP14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 PAPLNO95428 1278 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 PDGFBP01127 241 aaPredicted RBP14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 OR1D2P34982 312 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 ZNF131P52739 623 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 CCSER1Q9C0I3 900 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 HAPLN2Q9GZV7 340 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 KCNH6Q9H252 994 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 KCNK12Q9HB15 430 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 PARVGQ9HBI0 331 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 MTRRQ9UBK8 725 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 FBXO2Q9UK22 296 aaPredicted RBP14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 TBX20Q9UMR3 447 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 MTMR6Q9Y217 621 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 CDY1Q9Y6F8 540 aa14.3□□□□□ -0.12
PRKCSH-218ENST00000593053 HNRNPDLO14979 420 aaKnown RBP14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 TRAK2O60296 914 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 C8AP07357 584 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 CLTAP09496 248 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 CXCL8P10145 99 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 RPL9P32969 192 aaKnown RBP14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 DDIT3P35638 169 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 LIG4P49917 911 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 VCPP55072 806 aaKnown RBP14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 TDGQ13569 410 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 RAB33AQ14088 237 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 PPM1LQ5SGD2 360 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 IER5LQ5T953 404 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 RSPO2Q6UXX9 243 aaPredicted RBP14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 ANKS3Q6ZW76 656 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 GET4Q7L5D6 327 aaPredicted RBP14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 CLIC6Q96NY7 704 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 MYADMQ96S97 322 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 NUB1Q9Y5A7 615 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 BACE2Q9Y5Z0 518 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 MUC6Q6W4X9 2439 aa14.29□□□□□ -0.12
PRKCSH-218ENST00000593053 CCL16O15467 120 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 HNRNPA1P09651 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 SCP2P22307 547 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 NMT1P30419 496 aaKnown RBP14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 TNFSF9P41273 254 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 PLXNA3P51805 1871 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 SPAG1Q07617 926 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 GRASPQ7Z6J2 395 aaPredicted RBP14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 SLC7A14Q8TBB6 771 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 RSAD2Q8WXG1 361 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 KCNN1Q92952 543 aa14.28□□□□□ -0.12
PRKCSH-218ENST00000593053 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms