RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 NCF2P19878 526 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 ACTN3Q08043 901 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 ATP11CQ8NB49 1132 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 SEPT8Q92599 483 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 TRIM56Q9BRZ2 755 aaKnown RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 TRIM51Q9BSJ1 452 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 TMEM39AQ9NV64 488 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 TMEM253P0C7T8 217 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 CARSP49589 748 aaKnown RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 TAP1Q03518 808 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 PAPD7Q5XG87 772 aaKnown RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 BTBD8Q5XKL5 378 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 SMARCAL1Q9NZC9 954 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 EHD2Q9NZN4 543 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 INTUQ9ULD6 942 aa13.47□□□□□ -0.25
DNMT1-228ENST00000592705 TTC7AQ9ULT0 858 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-228ENST00000592705 PDHXO00330 501 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 PRRG1O14668 218 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 EIF3DO15371 548 aaKnown RBP eCLIP13.46□□□□□ -0.256e-7■■□□□ 13.8
DNMT1-228ENST00000592705 NR3C2P08235 984 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.25
DNMT1-228ENST00000592705 NTRK3Q16288 839 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF394Q53GI3 561 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 PARVAQ9NVD7 372 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 MSRAQ9UJ68 235 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 TRIM66O15016 1216 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 CYP26A1O43174 497 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 ZWINTO95229 277 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 CHN1P15882 459 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 ITIH2P19823 946 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 AP3M2P53677 418 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-228ENST00000592705 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 SDCCAG3Q96C92 435 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 IL17RAQ96F46 866 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 DYRK4Q9NR20 520 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 ARL2BPQ9Y2Y0 163 aa13.46□□□□□ -0.25
DNMT1-228ENST00000592705 SPAG7O75391 227 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 SP3Q02447 781 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 THOC5Q13769 683 aaKnown RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 CDO1Q16878 200 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 SPATA21Q7Z572 469 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 ZBED8Q8IZ13 594 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 CDCA5Q96FF9 252 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 PRMT6Q96LA8 375 aaPredicted RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 PRMT1Q99873 361 aaKnown RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 MRPL4Q9BYD3 311 aaKnown RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 NGRNQ9NPE2 291 aaKnown RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 POLRMTO00411 1230 aaKnown RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 CYBBP04839 570 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 SLC10A5Q5PT55 438 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 ATG4CQ96DT6 458 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 XPO6Q96QU8 1125 aaKnown RBP13.46□□□□□ -0.26
DNMT1-228ENST00000592705 L1RE1Q9UN81 338 aa13.46□□□□□ -0.26
DNMT1-228ENST00000592705 GOLGA8MH3BSY2 632 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 KPNA6O60684 536 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 SLC9A1P19634 815 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 KLRC1P26715 233 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 APOBEC2Q9Y235 224 aaKnown RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 KIAA0391O15091 583 aaKnown RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 MYBP10242 640 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 SCP2P22307 547 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 ARFIP2P53365 341 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 RAD51Q06609 339 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 ART3Q13508 389 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 SDE2Q6IQ49 451 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 AFG1LQ8WV93 481 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 HSPBP1Q9NZL4 362 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 FAF1Q9UNN5 650 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 MSCO60682 206 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 GPC3P51654 580 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 EFNA5P52803 228 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 CORO7P57737 925 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 SPOPLQ6IQ16 392 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 ST13P4Q8IZP2 240 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 CDR2Q01850 454 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 NBPF12Q5TAG4 269 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 KCND1Q9NSA2 647 aa13.45□□□□□ -0.26
DNMT1-228ENST00000592705 LSM7Q9UK45 103 aaKnown RBP13.45□□□□□ -0.26
DNMT1-228ENST00000592705 H0Y3Z8 333 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 FKBP1BP68106 108 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 NT5DC1Q5TFE4 455 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 LRRC31Q6UY01 552 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 CYFIP1Q7L576 1253 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 PPWD1Q96BP3 646 aaKnown RBP13.44□□□□□ -0.26
DNMT1-228ENST00000592705 MYOM1P52179 1685 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 FAM107AO95990 144 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms