RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, humanhuman

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-205ENST00000586275 CALML4Q96GE6 196 aa23.05■■□□□ 1.28
PDE4A-205ENST00000586275 ZBTB45Q96K62 511 aaPredicted RBP23.05■■□□□ 1.28
PDE4A-205ENST00000586275 SNX27Q96L92 541 aa23.05■■□□□ 1.28
PDE4A-205ENST00000586275 EPS15L1Q9UBC2 864 aa23.05■■□□□ 1.28
PDE4A-205ENST00000586275 NPHP3-ACAD11A0A0J9YXS1 232 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 ADAM12O43184 909 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 HNRNPA1P09651 372 aaKnown RBP eCLIP23.04■■□□□ 1.28
PDE4A-205ENST00000586275 KCNE1P15382 129 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 RAB33AQ14088 237 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 LIN9Q5TKA1 542 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 ZPBP2Q6X784 338 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 C3orf58Q8NDZ4 430 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 ZMAT2Q96NC0 199 aaKnown RBP23.04■■□□□ 1.28
PDE4A-205ENST00000586275 MYADMQ96S97 322 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.04■■□□□ 1.28
PDE4A-205ENST00000586275 CNTN3Q9P232 1028 aa23.04■■□□□ 1.28
PDE4A-205ENST00000586275 LARSQ9P2J5 1176 aaKnown RBP23.04■■□□□ 1.28
PDE4A-205ENST00000586275 H0YCG3 227 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 HARSP12081 509 aaKnown RBP23.03■■□□□ 1.28
PDE4A-205ENST00000586275 OR1D2P34982 312 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 LONP1P36776 959 aaKnown RBP23.03■■□□□ 1.28
PDE4A-205ENST00000586275 NUBP1P53384 320 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 CACNB1Q02641 598 aaPredicted RBP23.03■■□□□ 1.28
PDE4A-205ENST00000586275 CUL4AQ13619 759 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 ANKFY1Q9P2R3 1169 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 MTRRQ9UBK8 725 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 ODF2LQ9ULJ1 636 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 DUSP12Q9UNI6 340 aa23.03■■□□□ 1.28
PDE4A-205ENST00000586275 DENND4AQ7Z401 1863 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 I3L4J1 428 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 PODXLO00592 558 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 C8AP07357 584 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 TKTP29401 623 aaKnown RBP23.02■■□□□ 1.28
PDE4A-205ENST00000586275 BRCC3P46736 316 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 TCF15Q12870 199 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 NOLC1Q14978 699 aaKnown RBP eCLIP23.02■■□□□ 1.28
PDE4A-205ENST00000586275 SF3A1Q15459 793 aaKnown RBP23.02■■□□□ 1.28
PDE4A-205ENST00000586275 PPM1LQ5SGD2 360 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 ANKS3Q6ZW76 656 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 MFSD1Q9H3U5 465 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 BACE2Q9Y5Z0 518 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 PLXNA3P51805 1871 aa23.02■■□□□ 1.28
PDE4A-205ENST00000586275 CLDN3O15551 220 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 MEFVO15553 781 aaPredicted RBP23.01■■□□□ 1.27
PDE4A-205ENST00000586275 LAMP2P13473 410 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 PDCP20941 246 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 HOXA9P31269 272 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 RPL9P32969 192 aaKnown RBP23.01■■□□□ 1.27
PDE4A-205ENST00000586275 MRE11P49959 708 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 NCKAP1LP55160 1127 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 MCL1Q07820 350 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 UVSSAQ2YD98 709 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 HAUS6Q7Z4H7 955 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 GPBP1Q86WP2 473 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 RSAD2Q8WXG1 361 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 NXPE3Q969Y0 559 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 REEP2Q9BRK0 252 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 CDY1Q9Y6F8 540 aa23.01■■□□□ 1.27
PDE4A-205ENST00000586275 VPS37CA5D8V6 355 aaPredicted RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 SCP2P22307 547 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 FSHRP23945 695 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 GRIN1Q05586 938 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 DHX8Q14562 1220 aaKnown RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 SLC10A6Q3KNW5 377 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 SEZ6Q53EL9 994 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 AXDND1Q5T1B0 1012 aaPredicted RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 ASTLQ6HA08 431 aaPredicted RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 RSPO2Q6UXX9 243 aaPredicted RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 GET4Q7L5D6 327 aaPredicted RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 GRASPQ7Z6J2 395 aaPredicted RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 RASSF8Q8NHQ8 419 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 LRRC15Q8TF66 581 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 KCNN1Q92952 543 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 C18orf25Q96B23 403 aaPredicted RBP23■■□□□ 1.27
PDE4A-205ENST00000586275 BLOC1S4Q9NUP1 217 aa23■■□□□ 1.27
PDE4A-205ENST00000586275 CCL16O15467 120 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 XYLBO75191 536 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 PLCG1P19174 1290 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 MATR3P43243 847 aaKnown RBP eCLIP22.99■■□□□ 1.27
PDE4A-205ENST00000586275 CLCN5P51795 746 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 KARSQ15046 597 aaKnown RBP22.99■■□□□ 1.27
PDE4A-205ENST00000586275 RTL10Q7L3V2 364 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 SLC44A3Q8N4M1 653 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 MYCT1Q8N699 235 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 TMEM105Q8N8V8 129 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 SLC7A14Q8TBB6 771 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 RAD54LQ92698 747 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 BICD1Q96G01 975 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 FBXL21Q9UKT6 434 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 NUB1Q9Y5A7 615 aa22.99■■□□□ 1.27
PDE4A-205ENST00000586275 ZFP37Q9Y6Q3 630 aaPredicted RBP22.99■■□□□ 1.27
PDE4A-205ENST00000586275 SYN3O14994 580 aa22.98■■□□□ 1.27
PDE4A-205ENST00000586275 NARSO43776 548 aaKnown RBP22.98■■□□□ 1.27
PDE4A-205ENST00000586275 POU2F2P09086 479 aa22.98■■□□□ 1.27
PDE4A-205ENST00000586275 CLTAP09496 248 aa22.98■■□□□ 1.27
PDE4A-205ENST00000586275 ZNF131P52739 623 aa22.98■■□□□ 1.27
PDE4A-205ENST00000586275 MCM6Q14566 821 aa22.98■■□□□ 1.27
PDE4A-205ENST00000586275 IRF2BPLQ9H1B7 796 aa22.98■■□□□ 1.27
PDE4A-205ENST00000586275 PLEKHA5Q9HAU0 1116 aa22.98■■□□□ 1.27
PDE4A-205ENST00000586275 PARVGQ9HBI0 331 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms