RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 EMILIN2Q9BXX0 1053 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 GPR62Q9BZJ7 368 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 CLEC1BQ9P126 229 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 CD207Q9UJ71 328 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 BARX2Q9UMQ3 279 aaPredicted RBP26.09■■□□□ 1.77
LIMD2-207ENST00000579329 FAM50BQ9Y247 325 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 HPSEQ9Y251 543 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 STYXL1Q9Y6J8 313 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 TCHHQ07283 1943 aa26.09■■□□□ 1.77
LIMD2-207ENST00000579329 TRIP11Q15643 1979 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 A0A1W2PQ27 194 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 A0A1W2PQ64 194 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 A0A1W2PQD8 194 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 TMEM189-UBE2V1I3L0A0 370 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 MEFVO15553 781 aaPredicted RBP26.08■■□□□ 1.77
LIMD2-207ENST00000579329 ACTN4O43707 911 aaKnown RBP26.08■■□□□ 1.77
LIMD2-207ENST00000579329 FAM189A1O60320 539 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 TNFSF9P41273 254 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 KCNC3Q14003 757 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 USP41Q3LFD5 358 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 KIAA1841Q6NSI8 718 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 TMEM184AQ6ZMB5 413 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 UNC13DQ70J99 1090 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 TAS1R1Q7RTX1 841 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 HASPINQ8TF76 798 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 MSLNLQ96KJ4 702 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 FGFBP2Q9BYJ0 223 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 RPF1Q9H9Y2 349 aaKnown RBP26.08■■□□□ 1.77
LIMD2-207ENST00000579329 GDPD2Q9HCC8 539 aa26.08■■□□□ 1.77
LIMD2-207ENST00000579329 FAM237AA0A1B0GTK4 181 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 TISP43B9A030 160 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 LILRB3O75022 631 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 AFMP43652 599 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 RBM10P98175 930 aaKnown RBP26.07■■□□□ 1.76
LIMD2-207ENST00000579329 DSG1Q02413 1049 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 PPP2R3AQ06190 1150 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 SOX4Q06945 474 aaPredicted RBP26.07■■□□□ 1.76
LIMD2-207ENST00000579329 KCNA1Q09470 495 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 ELAVL2Q12926 359 aaKnown RBP26.07■■□□□ 1.76
LIMD2-207ENST00000579329 POSTNQ15063 836 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 CLUL1Q15846 466 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 LLGL2Q6P1M3 1020 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 DCLRE1AQ6PJP8 1040 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 SYCP3Q8IZU3 236 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 CASP10Q92851 521 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 DDX27Q96GQ7 796 aaKnown RBP26.07■■□□□ 1.76
LIMD2-207ENST00000579329 BLZF1Q9H2G9 400 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 TMEM206Q9H813 350 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 GOLGA2P5Q9HBQ8 144 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.07■■□□□ 1.76
LIMD2-207ENST00000579329 HCFC2Q9Y5Z7 792 aa26.07■■□□□ 1.76
LIMD2-207ENST00000579329 MUC6Q6W4X9 2439 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 TTC26A0AVF1 554 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 FAM86C2PA6NEL3 165 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 GRXCR2A6NFK2 248 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 C2CD2LO14523 706 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 SYKP43405 635 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 CLCNKBP51801 687 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 SMAD4Q13485 552 aaKnown RBP26.06■■□□□ 1.76
LIMD2-207ENST00000579329 UPP1Q16831 310 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 FAM26FQ5R3K3 315 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 ZBTB41Q5SVQ8 909 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 KIAA0319Q5VV43 1072 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 PPFIBP1Q86W92 1011 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 GPR65Q8IYL9 337 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 POMGNT1Q8WZA1 660 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 KLHL5Q96PQ7 755 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 C11orf16Q9NQ32 467 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 CHST7Q9NS84 486 aa26.06■■□□□ 1.76
LIMD2-207ENST00000579329 CPSF3Q9UKF6 684 aaKnown RBP26.06■■□□□ 1.76
LIMD2-207ENST00000579329 AGO2Q9UKV8 859 aaKnown RBP26.06■■□□□ 1.76
LIMD2-207ENST00000579329 ARIH1Q9Y4X5 557 aaPredicted RBP26.06■■□□□ 1.76
LIMD2-207ENST00000579329 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.05■■□□□ 1.76
LIMD2-207ENST00000579329 B3GAT3O94766 335 aa26.05■■□□□ 1.76
LIMD2-207ENST00000579329 PRPF6O94906 941 aaKnown RBP26.05■■□□□ 1.76
LIMD2-207ENST00000579329 CASP1P29466 404 aa26.05■■□□□ 1.76
LIMD2-207ENST00000579329 ENOX2Q16206 610 aaKnown RBP26.05■■□□□ 1.76
LIMD2-207ENST00000579329 FSIP1Q8NA03 581 aa26.05■■□□□ 1.76
LIMD2-207ENST00000579329 TSPAN18Q96SJ8 248 aa26.05■■□□□ 1.76
LIMD2-207ENST00000579329 IKZF4Q9H2S9 585 aa26.05■■□□□ 1.76
LIMD2-207ENST00000579329 CD320Q9NPF0 282 aa26.05■■□□□ 1.76
LIMD2-207ENST00000579329 PVALEFA0A1B0GWK0 134 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 PODXLO00592 558 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 EIF3DO15371 548 aaKnown RBP eCLIP26.04■■□□□ 1.76
LIMD2-207ENST00000579329 MBTPS2O43462 519 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 CNPP09543 421 aaKnown RBP26.04■■□□□ 1.76
LIMD2-207ENST00000579329 IL9P15248 144 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 NDUFA8P51970 172 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 CUL4BQ13620 913 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 ANKRD54Q6NXT1 300 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 CD302Q8IX05 232 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 GRAMD1CQ8IYS0 662 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 SMRP1Q8NCR6 262 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 HPS3Q969F9 1004 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 C18orf25Q96B23 403 aaPredicted RBP26.04■■□□□ 1.76
LIMD2-207ENST00000579329 PAGE5Q96GU1 130 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 RXFP1Q9HBX9 757 aa26.04■■□□□ 1.76
LIMD2-207ENST00000579329 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.04■■□□□ 1.76
LIMD2-207ENST00000579329 CIZ1Q9ULV3 898 aaPredicted RBP26.04■■□□□ 1.76
LIMD2-207ENST00000579329 PDCD11Q14690 1871 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms