RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 CLDND1Q9NY35 253 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 DDX56Q9NY93 547 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SPG21Q9NZD8 308 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SELENONQ9NZV5 590 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 AFF4Q9UHB7 1163 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 BCAP29Q9UHQ4 241 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 DNAI1Q9UI46 699 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ADGBQ8N7X0 1667 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ARHGAP10A1A4S6 786 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PHF20L1A8MW92 1017 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PDE2AO00408 941 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TBX3O15119 743 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PRPF4O43172 522 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 RHOBTB3O94955 611 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PTPRAP18433 802 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 AXLP30530 894 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 COPB1P53618 953 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TPI1P60174 286 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PSMC1P62191 440 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 APBA1Q02410 837 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PTH1RQ03431 593 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 YWHAHQ04917 246 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 MTA1Q13330 715 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC12A1Q13621 1099 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PSMD6Q15008 389 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 MTFR1Q15390 333 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 MAN2A1Q16706 1144 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SGSM1Q2NKQ1 1148 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF284Q2VY69 593 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ENOSF1Q7L5Y1 443 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 RD3Q7Z3Z2 195 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PALB2Q86YC2 1186 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 C10orf67Q8IYJ2 551 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TMCO5AQ8N6Q1 288 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 OR6P1Q8NGX9 317 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 P2RX5Q93086 422 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 FGD4Q96M96 766 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TBC1D32Q96NH3 1257 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 RUNDC3BQ96NL0 473 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 MKNK1Q9BUB5 465 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TRAIPQ9BWF2 469 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SPZ1Q9BXG8 430 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM129AQ9BZQ8 928 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 CATSPERBQ9H7T0 1116 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ECT2Q9H8V3 914 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 CERS4Q9HA82 394 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 KLK14Q9P0G3 267 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 GCNT4Q9P109 453 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PREX2Q70Z35 1606 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CLTCQ00610 1675 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 MOXD2PA6NHM9 499 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NOL3O60936 208 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 LUC7L3O95232 432 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PLEKHA8P1O95397 391 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 EYA4O95677 639 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 FGF19O95750 216 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 MMP1P03956 469 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CSF1RP07333 972 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 MYBL2P10244 700 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ATF2P15336 505 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ZFXP17010 805 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SYN1P17600 705 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CAPN2P17655 700 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PLCG1P19174 1290 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GARTP22102 1010 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CMA1P23946 247 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CALRP27797 417 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 MAPK9P45984 424 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 LHX1P48742 406 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 DYNLT1P63172 113 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 DEUP1Q05D60 604 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ITGA7Q13683 1181 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GIT2Q14161 759 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CFAP221Q4G0U5 840 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 COLEC12Q5KU26 742 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SYCP2LQ5T4T6 812 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ANKS6Q68DC2 871 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 RETSATQ6NUM9 610 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ANGPTL8Q6UXH0 198 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 KDELC2Q7Z4H8 507 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PCGF5Q86SE9 256 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SFR1Q86XK3 245 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GPIHBP1Q8IV16 184 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 APBB2Q92870 758 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PPP1R13BQ96KQ4 1090 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ZBTB18Q99592 522 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 OSMRQ99650 979 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC3Q9BQI4 270 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NT5C1AQ9BXI3 368 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 EHD4Q9H223 541 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 EXO5Q9H790 373 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 HOMER3Q9NSC5 361 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 BARHL2Q9NY43 387 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PCDHGB4Q9UN71 923 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SPATA31E1Q6ZUB1 1445 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM170AA1A519 330 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC66A2RUB6 948 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 DFFAO00273 331 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ENC1O14682 589 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms