RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 MYCT1Q8N699 235 aa22.75■■□□□ 1.23
CHRNB1-204ENST00000572857 ZHX3Q9H4I2 956 aa22.75■■□□□ 1.23
CHRNB1-204ENST00000572857 BLOC1S4Q9NUP1 217 aa22.75■■□□□ 1.23
CHRNB1-204ENST00000572857 TMEM189-UBE2V1I3L0A0 370 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 CLDN3O15551 220 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 TRAPPC3O43617 180 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 ZMYND10O75800 440 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 FAM13AO94988 1023 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 PDGFBP01127 241 aaPredicted RBP22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 SYT1P21579 422 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 FGFR3P22607 806 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 MARCKSP29966 332 aaPredicted RBP22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 BRCC3P46736 316 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 CEBPZQ03701 1054 aaKnown RBP22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 NOLC1Q14978 699 aaKnown RBP eCLIP22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 SPECC1Q5M775 1068 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 FAM173BQ6P4H8 233 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 CD300LGQ6UXG3 332 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 ZPBP2Q6X784 338 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 HAUS6Q7Z4H7 955 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 C3orf58Q8NDZ4 430 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 RAD54LQ92698 747 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 STAMQ92783 540 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 DDX27Q96GQ7 796 aaKnown RBP22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 PRKD2Q9BZL6 878 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 ZDHHC7Q9NXF8 308 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 ODF2LQ9ULJ1 636 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 CLUHO75153 1309 aa22.74■■□□□ 1.23
CHRNB1-204ENST00000572857 H0YCG3 227 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 PODXLO00592 558 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 N4BP1O75113 896 aaKnown RBP22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 KCNE1P15382 129 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 TKTP29401 623 aaKnown RBP22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 OR1D2P34982 312 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 IER5LQ5T953 404 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 LIN9Q5TKA1 542 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 C18orf25Q96B23 403 aaPredicted RBP22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 EPSTI1Q96J88 318 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 RHOBTB2Q9BYZ6 727 aa22.73■■□□□ 1.23
CHRNB1-204ENST00000572857 MEFVO15553 781 aaPredicted RBP22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 NCKAP1LP55160 1127 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 RESTQ13127 1097 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 PTPAQ15257 358 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 SLC10A6Q3KNW5 377 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 USP49Q70CQ1 688 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 KCNH6Q9H252 994 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 KCNK12Q9HB15 430 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 PARVGQ9HBI0 331 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 CNTN3Q9P232 1028 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 FBXW11Q9UKB1 542 aa22.72■■□□□ 1.23
CHRNB1-204ENST00000572857 K7ENM7 598 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 TBCAO75347 108 aaKnown RBP22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 LIG4P49917 911 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 VCPP55072 806 aaKnown RBP22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 MCL1Q07820 350 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 PPM1LQ5SGD2 360 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 LARP4BQ92615 738 aaKnown RBP22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 MYADMQ96S97 322 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 CCSER1Q9C0I3 900 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 HAPLN2Q9GZV7 340 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 MTRRQ9UBK8 725 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 TBX20Q9UMR3 447 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 POLIQ9UNA4 740 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 NUB1Q9Y5A7 615 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 CDY1Q9Y6F8 540 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 ZDBF2Q9HCK1 2354 aa22.71■■□□□ 1.23
CHRNB1-204ENST00000572857 TRAK2O60296 914 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 C8AP07357 584 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 RPL9P32969 192 aaKnown RBP22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 DDIT3P35638 169 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 SPAG1Q07617 926 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 TDGQ13569 410 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 RAB33AQ14088 237 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 RSPO2Q6UXX9 243 aaPredicted RBP22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 ANKS3Q6ZW76 656 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 GET4Q7L5D6 327 aaPredicted RBP22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 INTS4Q96HW7 963 aaKnown RBP22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 CLIC6Q96NY7 704 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 FBXO2Q9UK22 296 aaPredicted RBP22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 PLXNA3P51805 1871 aa22.7■■□□□ 1.22
CHRNB1-204ENST00000572857 MYO10Q9HD67 2058 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 K7ELQ4 463 aaPredicted RBP22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 HNRNPDLO14979 420 aaKnown RBP22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 CCL16O15467 120 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 CLTAP09496 248 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 CXCL8P10145 99 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 AVPR2P30518 371 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 ZNF131P52739 623 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 AXDND1Q5T1B0 1012 aaPredicted RBP22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 GRASPQ7Z6J2 395 aaPredicted RBP22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 SLC7A14Q8TBB6 771 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 RSAD2Q8WXG1 361 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 CCDC39Q9UFE4 941 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 SRPRBQ9Y5M8 271 aaKnown RBP22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 BACE2Q9Y5Z0 518 aa22.69■■□□□ 1.22
CHRNB1-204ENST00000572857 PAPLNO95428 1278 aa22.68■■□□□ 1.22
CHRNB1-204ENST00000572857 HNRNPA1P09651 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHRNB1-204ENST00000572857 NTHL1P78549 312 aa22.68■■□□□ 1.22
CHRNB1-204ENST00000572857 NHLH1Q02575 133 aa22.68■■□□□ 1.22
CHRNB1-204ENST00000572857 KRI1Q8N9T8 703 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms