RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 MAPTP10636 758 aaKnown RBP18.98■□□□□ 0.63
LITAF-211ENST00000572255 HARSP12081 509 aaKnown RBP18.98■□□□□ 0.63
LITAF-211ENST00000572255 SMTNP53814 917 aa18.98■□□□□ 0.63
LITAF-211ENST00000572255 SOX4Q06945 474 aaPredicted RBP18.98■□□□□ 0.63
LITAF-211ENST00000572255 LIN9Q5TKA1 542 aa18.98■□□□□ 0.63
LITAF-211ENST00000572255 CD300LGQ6UXG3 332 aa18.98■□□□□ 0.63
LITAF-211ENST00000572255 BRAPQ7Z569 592 aa18.98■□□□□ 0.63
LITAF-211ENST00000572255 C3orf58Q8NDZ4 430 aa18.98■□□□□ 0.63
LITAF-211ENST00000572255 ZBTB45Q96K62 511 aaPredicted RBP18.98■□□□□ 0.63
LITAF-211ENST00000572255 ACAP3Q96P50 834 aa18.98■□□□□ 0.63
LITAF-211ENST00000572255 IGSF9Q9P2J2 1179 aa18.98■□□□□ 0.63
LITAF-211ENST00000572255 DOCK6Q96HP0 2047 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 NPHP3-ACAD11A0A0J9YXS1 232 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 TRAPPC3O43617 180 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 TOM1L1O75674 476 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 KCNE1P15382 129 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 UBA7P41226 1012 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 TCF15Q12870 199 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 ARSHQ5FYA8 562 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 DDX27Q96GQ7 796 aaKnown RBP18.97■□□□□ 0.63
LITAF-211ENST00000572255 ZMAT2Q96NC0 199 aaKnown RBP18.97■□□□□ 0.63
LITAF-211ENST00000572255 SLC38A7Q9NVC3 462 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 ANKFY1Q9P2R3 1169 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 EPS15L1Q9UBC2 864 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 MTRRQ9UBK8 725 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 DUSP12Q9UNI6 340 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 CACNA1HO95180 2353 aa18.97■□□□□ 0.63
LITAF-211ENST00000572255 PDCD11Q14690 1871 aaKnown RBP18.97■□□□□ 0.63
LITAF-211ENST00000572255 I3L4J1 428 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 BMP15O95972 392 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 C8AP07357 584 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 HNRNPA1P09651 372 aaKnown RBP eCLIP18.96■□□□□ 0.63
LITAF-211ENST00000572255 TKTP29401 623 aaKnown RBP18.96■□□□□ 0.63
LITAF-211ENST00000572255 OR1D2P34982 312 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 BRCC3P46736 316 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 MRE11P49959 708 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
LITAF-211ENST00000572255 CUL4AQ13619 759 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 RAB33AQ14088 237 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 NOLC1Q14978 699 aaKnown RBP eCLIP18.96■□□□□ 0.631e-6■□□□□ 11
LITAF-211ENST00000572255 ZPBP2Q6X784 338 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 GET4Q7L5D6 327 aaPredicted RBP18.96■□□□□ 0.63
LITAF-211ENST00000572255 RSAD2Q8WXG1 361 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 CALML4Q96GE6 196 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 MFSD1Q9H3U5 465 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 CNTN3Q9P232 1028 aa18.96■□□□□ 0.63
LITAF-211ENST00000572255 VPS37CA5D8V6 355 aaPredicted RBP18.95■□□□□ 0.62
LITAF-211ENST00000572255 PODXLO00592 558 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 MEFVO15553 781 aaPredicted RBP18.95■□□□□ 0.62
LITAF-211ENST00000572255 NCKAP1LP55160 1127 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 PPM1LQ5SGD2 360 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 RSPO2Q6UXX9 243 aaPredicted RBP18.95■□□□□ 0.62
LITAF-211ENST00000572255 GRASPQ7Z6J2 395 aaPredicted RBP18.95■□□□□ 0.62
LITAF-211ENST00000572255 GPBP1Q86WP2 473 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 LRRC15Q8TF66 581 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 C18orf25Q96B23 403 aaPredicted RBP18.95■□□□□ 0.62
LITAF-211ENST00000572255 REEP2Q9BRK0 252 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.95■□□□□ 0.62
LITAF-211ENST00000572255 LARSQ9P2J5 1176 aaKnown RBP18.95■□□□□ 0.62
LITAF-211ENST00000572255 ODF2LQ9ULJ1 636 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 BACE2Q9Y5Z0 518 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 CDY1Q9Y6F8 540 aa18.95■□□□□ 0.62
LITAF-211ENST00000572255 H0YCG3 227 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 NARSO43776 548 aaKnown RBP18.94■□□□□ 0.62
LITAF-211ENST00000572255 LAMP2P13473 410 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 FSHRP23945 695 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 HOXA9P31269 272 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 LONP1P36776 959 aaKnown RBP18.94■□□□□ 0.62
LITAF-211ENST00000572255 NUBP1P53384 320 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 GRIN1Q05586 938 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 MCL1Q07820 350 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 DHX8Q14562 1220 aaKnown RBP18.94■□□□□ 0.62
LITAF-211ENST00000572255 SF3A1Q15459 793 aaKnown RBP18.94■□□□□ 0.62
LITAF-211ENST00000572255 SEZ6Q53EL9 994 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 AXDND1Q5T1B0 1012 aaPredicted RBP18.94■□□□□ 0.62
LITAF-211ENST00000572255 ASTLQ6HA08 431 aaPredicted RBP18.94■□□□□ 0.62
LITAF-211ENST00000572255 ANKS3Q6ZW76 656 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 TMEM105Q8N8V8 129 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 SLC7A14Q8TBB6 771 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 BLOC1S4Q9NUP1 217 aa18.94■□□□□ 0.62
LITAF-211ENST00000572255 CCL16O15467 120 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 CLDN3O15551 220 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 PLCG1P19174 1290 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 RPL9P32969 192 aaKnown RBP18.93■□□□□ 0.62
LITAF-211ENST00000572255 MATR3P43243 847 aaKnown RBP eCLIP18.93■□□□□ 0.62
LITAF-211ENST00000572255 NTHL1P78549 312 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 KARSQ15046 597 aaKnown RBP18.93■□□□□ 0.62
LITAF-211ENST00000572255 SLC10A6Q3KNW5 377 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 HAUS6Q7Z4H7 955 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 SLC44A3Q8N4M1 653 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 NXPE3Q969Y0 559 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 BICD1Q96G01 975 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 PHOX2BQ99453 314 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 HAPLN2Q9GZV7 340 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 FBXL21Q9UKT6 434 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 POLIQ9UNA4 740 aa18.93■□□□□ 0.62
LITAF-211ENST00000572255 GALR2O43603 387 aaPredicted RBP18.92■□□□□ 0.62
LITAF-211ENST00000572255 XYLBO75191 536 aa18.92■□□□□ 0.62
LITAF-211ENST00000572255 PDCP20941 246 aa18.92■□□□□ 0.62
LITAF-211ENST00000572255 CLCN5P51795 746 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms