RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MPZL3Q6UWV2 235 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 TMEM161BQ8NDZ6 487 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 LRRC15Q8TF66 581 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 RSAD2Q8WXG1 361 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 SNX27Q96L92 541 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 UROC1Q96N76 676 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 TOPORSQ9NS56 1045 aaPredicted RBP20.08■□□□□ 0.81
USB1-213ENST00000566292 IGSF9Q9P2J2 1179 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 EPS15L1Q9UBC2 864 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 DUSP12Q9UNI6 340 aa20.08■□□□□ 0.81
USB1-213ENST00000566292 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.08■□□□□ 0.81
USB1-213ENST00000566292 I3L4J1 428 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 MAPTP10636 758 aaKnown RBP20.07■□□□□ 0.8
USB1-213ENST00000566292 BRCC3P46736 316 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
USB1-213ENST00000566292 ARSHQ5FYA8 562 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 PDXDC1Q6P996 788 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 RSPO2Q6UXX9 243 aaPredicted RBP20.07■□□□□ 0.8
USB1-213ENST00000566292 TMEM105Q8N8V8 129 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 CDK5RAP3Q96JB5 506 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 ACAP3Q96P50 834 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 TCHPQ9BT92 498 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 MTRRQ9UBK8 725 aa20.07■□□□□ 0.8
USB1-213ENST00000566292 NARSO43776 548 aaKnown RBP20.06■□□□□ 0.8
USB1-213ENST00000566292 HARSP12081 509 aaKnown RBP20.06■□□□□ 0.8
USB1-213ENST00000566292 TKTP29401 623 aaKnown RBP20.06■□□□□ 0.8
USB1-213ENST00000566292 OR1D2P34982 312 aa20.06■□□□□ 0.8
USB1-213ENST00000566292 GRIN1Q05586 938 aa20.06■□□□□ 0.8
USB1-213ENST00000566292 RAB33AQ14088 237 aa20.06■□□□□ 0.8
USB1-213ENST00000566292 DDX27Q96GQ7 796 aaKnown RBP20.06■□□□□ 0.8
USB1-213ENST00000566292 AK8Q96MA6 479 aa20.06■□□□□ 0.8
USB1-213ENST00000566292 KCND2Q9NZV8 630 aa20.06■□□□□ 0.8
USB1-213ENST00000566292 CNTN3Q9P232 1028 aa20.06■□□□□ 0.8
USB1-213ENST00000566292 MYH15Q9Y2K3 1946 aa20.06■□□□□ 0.8
USB1-213ENST00000566292 TOM1L1O75674 476 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 C8AP07357 584 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 HNRNPA1P09651 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
USB1-213ENST00000566292 KCNE1P15382 129 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 SMTNP53814 917 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 STRN3Q13033 797 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 LIN9Q5TKA1 542 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 GET4Q7L5D6 327 aaPredicted RBP20.05■□□□□ 0.8
USB1-213ENST00000566292 HAPLN2Q9GZV7 340 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 SLC38A7Q9NVC3 462 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.05■□□□□ 0.8
USB1-213ENST00000566292 ANKFY1Q9P2R3 1169 aa20.05■□□□□ 0.8
USB1-213ENST00000566292 PODXLO00592 558 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 LAMP2P13473 410 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 NTHL1P78549 312 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 NOLC1Q14978 699 aaKnown RBP eCLIP20.04■□□□□ 0.8
USB1-213ENST00000566292 SEZ6Q53EL9 994 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 PPM1LQ5SGD2 360 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 CWF19L1Q69YN2 538 aaKnown RBP20.04■□□□□ 0.8
USB1-213ENST00000566292 ASTLQ6HA08 431 aaPredicted RBP20.04■□□□□ 0.8
USB1-213ENST00000566292 ZPBP2Q6X784 338 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 GRASPQ7Z6J2 395 aaPredicted RBP20.04■□□□□ 0.8
USB1-213ENST00000566292 C18orf25Q96B23 403 aaPredicted RBP20.04■□□□□ 0.8
USB1-213ENST00000566292 MFSD1Q9H3U5 465 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 BLOC1S4Q9NUP1 217 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 KCNG1Q9UIX4 513 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 BACE2Q9Y5Z0 518 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 CDY1Q9Y6F8 540 aa20.04■□□□□ 0.8
USB1-213ENST00000566292 CCL16O15467 120 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 SLC26A4O43511 780 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 GALR2O43603 387 aaPredicted RBP20.03■□□□□ 0.8
USB1-213ENST00000566292 TRAPPC3O43617 180 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 NPR3P17342 541 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 HOXA9P31269 272 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 NUBP1P53384 320 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 NCKAP1LP55160 1127 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 MCL1Q07820 350 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 CUL4AQ13619 759 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 SLC10A6Q3KNW5 377 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 AXDND1Q5T1B0 1012 aaPredicted RBP20.03■□□□□ 0.8
USB1-213ENST00000566292 ANKS3Q6ZW76 656 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 BRAPQ7Z569 592 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 SLC44A3Q8N4M1 653 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 SLC7A14Q8TBB6 771 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 REEP2Q9BRK0 252 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 FAM86C1Q9NVL1 165 aa20.03■□□□□ 0.8
USB1-213ENST00000566292 ANHXE9PGG2 379 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 FSHRP23945 695 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 UBA7P41226 1012 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 CLCN5P51795 746 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 HTR4Q13639 388 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 DHX8Q14562 1220 aaKnown RBP20.02■□□□□ 0.8
USB1-213ENST00000566292 SF3A1Q15459 793 aaKnown RBP20.02■□□□□ 0.8
USB1-213ENST00000566292 HAUS6Q7Z4H7 955 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 GPBP1Q86WP2 473 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 TMEM130Q8N3G9 435 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 FLCNQ8NFG4 579 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 ST13P5Q8NFI4 369 aaPredicted RBP20.02■□□□□ 0.8
USB1-213ENST00000566292 KCNN1Q92952 543 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 NXPE3Q969Y0 559 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 CALML4Q96GE6 196 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 LARSQ9P2J5 1176 aaKnown RBP20.02■□□□□ 0.8
USB1-213ENST00000566292 FBXL21Q9UKT6 434 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 ODF2LQ9ULJ1 636 aa20.02■□□□□ 0.8
USB1-213ENST00000566292 USP34Q70CQ2 3546 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 H0Y858 1186 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms