RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 CLDN3O15551 220 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 TBCAO75347 108 aaKnown RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 C1RP00736 705 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 CXCL8P10145 99 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 GAP43P17677 238 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 FGFR3P22607 806 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 HOXD13P35453 343 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 ENOX2Q16206 610 aaKnown RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 LILRA6Q6PI73 481 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 CRELD2Q6UXH1 353 aaPredicted RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 APBB1IPQ7Z5R6 666 aaPredicted RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 LNX1Q8TBB1 728 aaPredicted RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 HASPINQ8TF76 798 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 LEO1Q8WVC0 666 aaPredicted RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 C18orf25Q96B23 403 aaPredicted RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 HVCN1Q96D96 273 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 TRIM9Q9C026 710 aa16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 MRPL17Q9NRX2 175 aaKnown RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 CPSF3Q9UKF6 684 aaKnown RBP16.17■□□□□ 0.18
RPUSD1-204ENST00000563560 OGTO15294 1046 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 KRT18P05783 430 aaKnown RBP16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 URODP06132 367 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 USP41Q3LFD5 358 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 KANK3Q6NY19 840 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 GJD3Q8N144 294 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 GLIS3Q8NEA6 775 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 PIK3R5Q8WYR1 880 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 STAMQ92783 540 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 UROC1Q96N76 676 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 TCHPQ9BT92 498 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 ADAM7Q9H2U9 754 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 CUEDC2Q9H467 287 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 PLEKHA5Q9HAU0 1116 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 TOPORSQ9NS56 1045 aaPredicted RBP16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 HPSEQ9Y251 543 aa16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 SF3B1O75533 1304 aaKnown RBP eCLIP16.16■□□□□ 0.18
RPUSD1-204ENST00000563560 MYO10Q9HD67 2058 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 HNRNPDLO14979 420 aaKnown RBP16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 TBC1D4O60343 1298 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 NR1I2O75469 434 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 CLTAP09496 248 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 MYBP10242 640 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 ABCD1P33897 745 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 LIG4P49917 911 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 L1TD1Q5T7N2 865 aaKnown RBP16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 DCLRE1AQ6PJP8 1040 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 PRSS55Q6UWB4 352 aaPredicted RBP16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 RSPO2Q6UXX9 243 aaPredicted RBP16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 EPM2AIP1Q7L775 607 aaPredicted RBP16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 PPFIBP1Q86W92 1011 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 C12orf76Q8N812 135 aaPredicted RBP16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 ZSWIM2Q8NEG5 633 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 C7orf25Q9BPX7 421 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 CLSTN3Q9BQT9 956 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 C11orf16Q9NQ32 467 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 TUBGCP4Q9UGJ1 667 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 CFAP45Q9UL16 551 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 FAM50BQ9Y247 325 aa16.15■□□□□ 0.18
RPUSD1-204ENST00000563560 TECTAO75443 2155 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 LACTBL1A8MY62 500 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 C2CD2LO14523 706 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 ADAM12O43184 909 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 ACTN4O43707 911 aaKnown RBP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 TADA2AO75478 443 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 LRPAP1P30533 357 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 YARSP54577 528 aaKnown RBP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 WNT7BP56706 349 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 BMS1Q14692 1282 aaKnown RBP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 CMASQ8NFW8 434 aaPredicted RBP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 HPS3Q969F9 1004 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 DHX58Q96C10 678 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 FBXL18Q96ME1 805 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 PHF7Q9BWX1 381 aaPredicted RBP16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 EMILIN2Q9BXX0 1053 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 RHOBTB2Q9BYZ6 727 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 ZHX3Q9H4I2 956 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 PANK4Q9NVE7 773 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 DZANK1Q9NVP4 752 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 SSX2IPQ9Y2D8 614 aa16.14■□□□□ 0.17
RPUSD1-204ENST00000563560 PI4K2BG5E9Z4 385 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 PODXLO00592 558 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 POLR2DO15514 142 aaKnown RBP16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 RPL17P18621 184 aaKnown RBP16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 CASP1P29466 404 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 BRCC3P46736 316 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 ME1P48163 572 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 POU5F1Q01860 360 aaKnown RBP16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 ITIH3Q06033 890 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 MRPL58Q14197 206 aaKnown RBP16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 FAM171A1Q5VUB5 890 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 ADALQ6DHV7 355 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 KIAA1841Q6NSI8 718 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 IQUBQ8NA54 791 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 ZNF707Q96C28 371 aaPredicted RBP16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 BICD1Q96G01 975 aa16.13■□□□□ 0.17
RPUSD1-204ENST00000563560 DDX27Q96GQ7 796 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms