RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 GBP2P32456 591 aaPredicted RBP16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 STRN3Q13033 797 aa16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 TDGQ13569 410 aa16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 DCLRE1AQ6PJP8 1040 aa16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 TMEM161BQ8NDZ6 487 aa16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 AK8Q96MA6 479 aa16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 TCHPQ9BT92 498 aa16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
KLHDC4-208ENST00000562261 SLC26A4O43511 780 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 BMP15O95972 392 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 MAPTP10636 758 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 IGFBP6P24592 240 aaPredicted RBP16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 SMTNP53814 917 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 SOX4Q06945 474 aaPredicted RBP16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 CD300LGQ6UXG3 332 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 BRAPQ7Z569 592 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 C3orf58Q8NDZ4 430 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 ACAP3Q96P50 834 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 SLC38A7Q9NVC3 462 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 IGSF9Q9P2J2 1179 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 DOCK8Q8NF50 2099 aa16.63■□□□□ 0.25
KLHDC4-208ENST00000562261 NPHP3-ACAD11A0A0J9YXS1 232 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 ADAM12O43184 909 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 TRAPPC3O43617 180 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 TOM1L1O75674 476 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 HARSP12081 509 aaKnown RBP16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 CUL4AQ13619 759 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 LIN9Q5TKA1 542 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 ZPBP2Q6X784 338 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 CALML4Q96GE6 196 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 DDX27Q96GQ7 796 aaKnown RBP16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 ZBTB45Q96K62 511 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 ZMAT2Q96NC0 199 aaKnown RBP16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 MYADMQ96S97 322 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 CNTN3Q9P232 1028 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 ANKFY1Q9P2R3 1169 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 EPS15L1Q9UBC2 864 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 MTRRQ9UBK8 725 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 SPTBN4Q9H254 2564 aa16.62■□□□□ 0.25
KLHDC4-208ENST00000562261 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 C8AP07357 584 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 HNRNPA1P09651 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 KCNE1P15382 129 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 TKTP29401 623 aaKnown RBP16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 UBA7P41226 1012 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 BRCC3P46736 316 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 RAB33AQ14088 237 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 PPM1LQ5SGD2 360 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 GET4Q7L5D6 327 aaPredicted RBP16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.256e-7■■■■□ 24.7
KLHDC4-208ENST00000562261 LARSQ9P2J5 1176 aaKnown RBP16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 ODF2LQ9ULJ1 636 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 MYO15AQ9UKN7 3530 aa16.61■□□□□ 0.25
KLHDC4-208ENST00000562261 H0Y858 1186 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 H0YCG3 227 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 I3L4J1 428 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 PODXLO00592 558 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 MEFVO15553 781 aaPredicted RBP16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 HOXA9P31269 272 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 OR1D2P34982 312 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 NUBP1P53384 320 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 NCKAP1LP55160 1127 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 GRIN1Q05586 938 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 MCL1Q07820 350 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 SF3A1Q15459 793 aaKnown RBP16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 RSPO2Q6UXX9 243 aaPredicted RBP16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 ANKS3Q6ZW76 656 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 GPBP1Q86WP2 473 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 KCNN1Q92952 543 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 REEP2Q9BRK0 252 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 IRF2BPLQ9H1B7 796 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 MFSD1Q9H3U5 465 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 BLOC1S4Q9NUP1 217 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 BACE2Q9Y5Z0 518 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 CDY1Q9Y6F8 540 aa16.6■□□□□ 0.25
KLHDC4-208ENST00000562261 DOCK6Q96HP0 2047 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 VPS37CA5D8V6 355 aaPredicted RBP16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 CLDN3O15551 220 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 LAMP2P13473 410 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 FSHRP23945 695 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 UVSSAQ2YD98 709 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 SLC10A6Q3KNW5 377 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 SEZ6Q53EL9 994 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 GRASPQ7Z6J2 395 aaPredicted RBP16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 TMEM105Q8N8V8 129 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 RASSF8Q8NHQ8 419 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 SLC7A14Q8TBB6 771 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 RSAD2Q8WXG1 361 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 NXPE3Q969Y0 559 aa16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 C18orf25Q96B23 403 aaPredicted RBP16.59■□□□□ 0.25
KLHDC4-208ENST00000562261 PTPRZ1P23471 2315 aaPredicted RBP16.58■□□□□ 0.25
KLHDC4-208ENST00000562261 CCL16O15467 120 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms