RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C16orf70Q9BSU1 422 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
SPG11-213ENST00000558988 SP110Q9HB58 689 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 SETD4Q9NVD3 440 aa8.39□□□□□ -1.07
SPG11-213ENST00000558988 KLF18A0A0U1RQI7 1052 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 LCHNA4D1U4 455 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 MEIS2O14770 477 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 TREHO43280 583 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 CDC45O75419 566 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 TGFB3P10600 412 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 PI3P19957 117 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 NAPAP54920 295 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 ARHGAP4P98171 946 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 NEDD9Q14511 834 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 NECTIN1Q15223 517 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 ADCK5Q3MIX3 580 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 BMP2KLQ5H9B9 411 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 PPM1JQ5JR12 505 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 PCNX4Q63HM2 1172 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 CNKSR3Q6P9H4 555 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 METTL7BQ6UX53 244 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 TMTC3Q6ZXV5 915 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 MYOCDQ8IZQ8 938 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 GDPD5Q8WTR4 605 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 INPP4AQ96PE3 977 aaPredicted RBP8.38□□□□□ -1.07
SPG11-213ENST00000558988 NEK1Q96PY6 1258 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 UIMC1Q96RL1 719 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 GPR20Q99678 358 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 SLC6A17Q9H1V8 727 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 ADAMTS10Q9H324 1103 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 THEGQ9P2T0 379 aa8.38□□□□□ -1.07
SPG11-213ENST00000558988 ZNF215Q9UL58 517 aaPredicted RBP8.38□□□□□ -1.07
SPG11-213ENST00000558988 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 GOLGA8AA7E2F4 631 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 GOLGA8BA8MQT2 603 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 RSPH10B2B2RC85 870 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 ZBTB43O43298 467 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 BAIAP3O94812 1187 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 RSPH10BP0C881 870 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 IBSPP21815 317 aaPredicted RBP8.37□□□□□ -1.07
SPG11-213ENST00000558988 TCF7P36402 384 aaPredicted RBP8.37□□□□□ -1.07
SPG11-213ENST00000558988 LIFRP42702 1097 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 IGBP1P78318 339 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 TFF2Q03403 129 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 TAP1Q03518 808 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 MTMR1Q13613 665 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 GPNMBQ14956 572 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 TRIM71Q2Q1W2 868 aaKnown RBP8.37□□□□□ -1.07
SPG11-213ENST00000558988 WWC2Q6AWC2 1192 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 C22orf34Q6ZV56 151 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 SYT8Q8NBV8 401 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 DBF4BQ8NFT6 615 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 GLG1Q92896 1179 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 PBXIP1Q96AQ6 731 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 CCDC136Q96JN2 1154 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 MAP3K14Q99558 947 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 RNPEPQ9H4A4 650 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 ZNF552Q9H707 407 aaPredicted RBP8.37□□□□□ -1.07
SPG11-213ENST00000558988 TMEM260Q9NX78 707 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 BRPF3Q9ULD4 1205 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 PCDHA6Q9UN73 950 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 PCDHA8Q9Y5H6 950 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 CAPN6Q9Y6Q1 641 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 PTPRSQ13332 1948 aa8.37□□□□□ -1.07
SPG11-213ENST00000558988 ABHD14A-ACY1A0A1B0GW23 586 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 DDX39AO00148 427 aaKnown RBP8.36□□□□□ -1.07
SPG11-213ENST00000558988 ATP9AO75110 1047 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 STAM2O75886 525 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 CSPG5O95196 566 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 ICAM3P32942 547 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 AFF3P51826 1226 aaKnown RBP8.36□□□□□ -1.07
SPG11-213ENST00000558988 ADCY7P51828 1080 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 GRB10Q13322 594 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 MTMR3Q13615 1198 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 SFRP5Q5T4F7 317 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.36□□□□□ -1.07
SPG11-213ENST00000558988 GJD3Q8N144 294 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 PHOSPHO2Q8TCD6 241 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 LMBR1Q8WVP7 490 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 DACT3Q96B18 629 aaPredicted RBP8.36□□□□□ -1.07
SPG11-213ENST00000558988 ZBTB10Q96DT7 871 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 JAKMIP1Q96N16 626 aaKnown RBP8.36□□□□□ -1.07
SPG11-213ENST00000558988 MTA3Q9BTC8 594 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 FAM49AQ9H0Q0 323 aaPredicted RBP8.36□□□□□ -1.07
SPG11-213ENST00000558988 EHMT1Q9H9B1 1298 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 ABCB6Q9NP58 842 aa8.36□□□□□ -1.07
SPG11-213ENST00000558988 PRRC2BQ5JSZ5 2229 aaKnown RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 EMSYQ7Z589 1322 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 SLC22A31A6NKX4 558 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 FZD6O60353 706 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 SLITRK5O94991 958 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 PARNO95453 639 aaKnown RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 CXCL10P02778 98 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 AMHP03971 560 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 GNAT1P11488 350 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 SMARCA1P28370 1054 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 ZNF76P36508 570 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms