RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 WHAMMQ8TF30 809 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 ING5Q8WYH8 240 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 LPPQ93052 612 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 GCOM2Q9BZD3 368 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 UBN1Q9NPG3 1134 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 RBM12Q9NTZ6 932 aaKnown RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 FAM105AQ9NUU6 356 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 FBXW11Q9UKB1 542 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 PRG3Q9Y2Y8 225 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 UBIAD1Q9Y5Z9 338 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 PIEZO2Q9H5I5 2752 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 MYO5AQ9Y4I1 1855 aaKnown RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 CNTNAP2Q9UHC6 1331 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 FREM2Q5SZK8 3169 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 F5P12259 2224 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 CCDC194A0A1B0GVG4 234 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 PALM3A6NDB9 673 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 PIK3CDO00329 1044 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 MEFVO15553 781 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 EXTL3O43909 919 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 MAN1A2O60476 641 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 MICAL2O94851 1124 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 WISP1O95388 367 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 FGAP02671 866 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 SFPQP23246 707 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 GBP1P32455 592 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 SH3BP2P78314 561 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 SEMA3BQ13214 749 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 NNTQ13423 1086 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 NR6A1Q15406 480 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 EFCAB12Q6NXP0 572 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 Q6ZS52 159 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 KRT25Q7Z3Z0 450 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 CYP2U1Q7Z449 544 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 RALGPS2Q86X27 583 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 YAF2Q8IY57 180 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 EPS8L1Q8TE68 723 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 ADAMTS14Q8WXS8 1223 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 E2F7Q96AV8 911 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 ZKSCAN3Q9BRR0 538 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 RSAD1Q9HA92 442 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 AVENQ9NQS1 362 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 ZNF302Q9NR11 478 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 EVLQ9UI08 416 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 APOBEC2Q9Y235 224 aaKnown RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 PCDHB9Q9Y5E1 797 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 BAZ2AQ9UIF9 1905 aaKnown RBP6.48□□□□□ -1.37
ATXN3-245ENST00000556958 NFASCO94856 1347 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 SALL3Q9BXA9 1300 aa6.48□□□□□ -1.37
ATXN3-245ENST00000556958 MYO9AB2RTY4 2548 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 MYH8P13535 1937 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 NOTCH2Q04721 2471 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 IGKV6D-21A0A0A0MT36 114 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 ZNF862O60290 1169 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 EFEMP2O95967 443 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 POMCP01189 267 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 RHOP08100 348 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 PTPN2P17706 415 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 RPL17P18621 184 aaKnown RBP6.47□□□□□ -1.37
ATXN3-245ENST00000556958 FGFR4P22455 802 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 DPP6P42658 865 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 GPC3P51654 580 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 CLCN3P51790 818 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 PTPAQ15257 358 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 PTPRNQ16849 979 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 USP39Q53GS9 565 aaKnown RBP6.47□□□□□ -1.37
ATXN3-245ENST00000556958 FAM78AQ5JUQ0 283 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 SWSAP1Q6NVH7 229 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 MIS18BP1Q6P0N0 1132 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 USP17L6PQ6QN14 398 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 LRRC69Q6ZNQ3 347 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 MFSD6LQ8IWD5 586 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 SLC7A14Q8TBB6 771 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 SMARCD2Q92925 531 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 PIGSQ96S52 555 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 ZSCAN10Q96SZ4 725 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-245ENST00000556958 KLF16Q9BXK1 252 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-245ENST00000556958 KCNH7Q9NS40 1196 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 C2orf42Q9NWW7 574 aa6.47□□□□□ -1.37
ATXN3-245ENST00000556958 PIN4Q9Y237 131 aaKnown RBP6.47□□□□□ -1.37
ATXN3-245ENST00000556958 SDK1Q7Z5N4 2213 aa6.46□□□□□ -1.37
ATXN3-245ENST00000556958 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 MYBPHLA2RUH7 354 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 ENO4A6NNW6 628 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 ZBTB42B2RXF5 422 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 SPECC1L-ADORA2AF8WAN1 911 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 CHADO15335 359 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 FOXP2O15409 715 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 B4GALT3O60512 393 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 OPHN1O60890 802 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 TADA2AO75478 443 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 CCNYL3P0C7X3 344 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 KIF5BP33176 963 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 MAPK8P45983 427 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 DNM2P50570 870 aa6.46□□□□□ -1.38
ATXN3-245ENST00000556958 WDR4P57081 412 aaKnown RBP6.46□□□□□ -1.38
ATXN3-245ENST00000556958 CYP4F3Q08477 520 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms