RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-208ENST00000555905 MRPL10Q7Z7H8 261 aaKnown RBP11.94□□□□□ -0.5
TMEM260-208ENST00000555905 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 NT5DC4Q86YG4 428 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 C7orf61Q8IZ16 206 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 TNS4Q8IZW8 715 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 RNF169Q8NCN4 708 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 ANKRD36BP1Q96IX9 119 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 SNX27Q96L92 541 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-208ENST00000555905 TMEM8AQ9HCN3 771 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 DERAQ9Y315 318 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 C2CD2Q9Y426 696 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 GOLGA6L6A8MZA4 724 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 C9IYK1 514 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 ENPP3O14638 875 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 PMM2O15305 246 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 PHACTR2O75167 634 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 TMEM191BP0C7N4 346 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 ITGB8P26012 769 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 WNT7BP56706 349 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 FAM189BP81408 668 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 TFAMQ00059 246 aaKnown RBP11.93□□□□□ -0.5
TMEM260-208ENST00000555905 BIRC3Q13489 604 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 IKBKEQ14164 716 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 SYCP1Q15431 976 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 EXOC3L4Q17RC7 722 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 CBWD6Q4V339 395 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 CBWD3Q5JTY5 395 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 CBWD5Q5RIA9 395 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 LMBRD2Q68DH5 695 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-208ENST00000555905 SPECC1LQ69YQ0 1117 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 JADE1Q6IE81 842 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 RTN4RL1Q86UN2 441 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-208ENST00000555905 VSTM4Q8IW00 320 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 ERGIC2Q96RQ1 377 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 RPS6KC1Q96S38 1066 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 TMEM117Q9H0C3 514 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 KLK14Q9P0G3 267 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 GCNT4Q9P109 453 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 CNTN3Q9P232 1028 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 GIT1Q9Y2X7 761 aa11.93□□□□□ -0.5
TMEM260-208ENST00000555905 PDCD11Q14690 1871 aaKnown RBP11.93□□□□□ -0.5
TMEM260-208ENST00000555905 TRIP11Q15643 1979 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 PTPRJQ12913 1337 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 ITIH6Q6UXX5 1313 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 TET1Q8NFU7 2136 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 MEFVO15553 781 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-208ENST00000555905 XPOTO43592 962 aaKnown RBP11.92□□□□□ -0.5
TMEM260-208ENST00000555905 NFICP08651 508 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 KCNE1P15382 129 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 CSF2RAP15509 400 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 PBX1P40424 430 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 PIK3CAP42336 1068 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 PPIGQ13427 754 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM260-208ENST00000555905 ALKAL1Q6UXT8 129 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 SV2AQ7L0J3 742 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 FBXL13Q8NEE6 735 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 OR5B17Q8NGF7 314 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 LINC01599Q8WXQ3 324 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 ZNF516Q92618 1163 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 LPPQ93052 612 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 CRACR2AQ9BSW2 395 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 MTMR12Q9C0I1 747 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
TMEM260-208ENST00000555905 RSAD1Q9HA92 442 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 TMEM161AQ9NX61 479 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 LRFN2Q9ULH4 789 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
TMEM260-208ENST00000555905 PCDHB7Q9Y5E2 793 aa11.92□□□□□ -0.5
TMEM260-208ENST00000555905 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM260-208ENST00000555905 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-208ENST00000555905 MICAL3Q7RTP6 2002 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 ABHD14A-ACY1A0A1B0GW23 586 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 ARL5CA6NH57 179 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 EFCAB14O75071 495 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 C4BPAP04003 597 aaKnown RBP11.91□□□□□ -0.5
TMEM260-208ENST00000555905 TPM1P09493 284 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 ACTN1P12814 892 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 ATF7P17544 494 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-208ENST00000555905 PON1P27169 355 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 MLH1P40692 756 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 FPGSQ05932 587 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 TRPC3Q13507 836 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 PTPN21Q16825 1174 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 ZACNQ401N2 412 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 XKR4Q5GH76 650 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 IER5LQ5T953 404 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 TDRD10Q5VZ19 366 aaKnown RBP11.91□□□□□ -0.5
TMEM260-208ENST00000555905 GLB1LQ6UWU2 654 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 AGMOQ6ZNB7 445 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 C15orf39Q6ZRI6 1047 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 TRAPPC11Q7Z392 1133 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 ZNF598Q86UK7 904 aaKnown RBP11.91□□□□□ -0.5
TMEM260-208ENST00000555905 PPFIBP1Q86W92 1011 aa11.91□□□□□ -0.5
TMEM260-208ENST00000555905 EFCAB13Q8IY85 973 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms