RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 HPS4Q9NQG7 708 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 CCDC177Q9NQR7 707 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 CHST12Q9NRB3 414 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ZC3H7BQ9UGR2 993 aaKnown RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ATPIF1Q9UII2 106 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 TTC7AQ9ULT0 858 aaPredicted RBP10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 FADS3Q9Y5Q0 445 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 IVNS1ABPQ9Y6Y0 642 aa10.99□□□□□ -0.65
EFCAB11-208ENST00000555872 ERVV-1B6SEH8 477 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 KRIT1O00522 736 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 BIRC5O15392 142 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 RNGTTO60942 597 aaKnown RBP10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 GM2AP17900 193 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 SLCO1A2P46721 670 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 MXI1P50539 228 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 AP3M2P53677 418 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 TRIM71Q2Q1W2 868 aaKnown RBP10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 SIGIRRQ6IA17 410 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 KIF6Q6ZMV9 814 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 CCNJLQ8IV13 435 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 HERVK_113Q902F9 699 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 P2RX5Q93086 422 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 FMO2Q99518 471 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 RXFP1Q9HBX9 757 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 CYP39A1Q9NYL5 469 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 PFDN2Q9UHV9 154 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 SIK3Q9Y2K2 1263 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 GAKO14976 1311 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 MYH3P11055 1940 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 NOTOA8MTQ0 251 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 E7ENQ6 273 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 EYA2O00167 538 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 HAT1O14929 419 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 WEE1P30291 646 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 SERPINB4P48594 390 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 SUPT20HQ8NEM7 779 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 ASAP3Q8TDY4 903 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 SDCCAG3Q96C92 435 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 PYM1Q9BRP8 204 aaKnown RBP10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 CCDC134Q9H6E4 229 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 DNAJC18Q9H819 358 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 XAB2Q9HCS7 855 aaKnown RBP10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 NLRC4Q9NPP4 1024 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 DSEQ9UL01 958 aa10.98□□□□□ -0.65
EFCAB11-208ENST00000555872 FOXN3O00409 490 aaPredicted RBP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 ENPP3O14638 875 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 KLRC4O43908 158 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 KLHL41O60662 606 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 INMTO95050 263 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 CCNFP41002 786 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 NLRP5P59047 1200 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 FOXO4P98177 505 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 RCN2Q14257 317 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 ARL13BQ3SXY8 428 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 HGSNATQ68CP4 663 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 RFPL4BQ6ZWI9 263 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 SESTD1Q86VW0 696 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 ALDH16A1Q8IZ83 802 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 NLGN1Q8N2Q7 840 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 FANCBQ8NB91 859 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 OSCP1Q8WVF1 389 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 BAP1Q92560 729 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 GFM2Q969S9 779 aaKnown RBP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 PGM2Q96G03 612 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 ISCA1Q9BUE6 129 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 PACSIN1Q9BY11 444 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 STK32BQ9NY57 414 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 DDX56Q9NY93 547 aaKnown RBP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 ARL2BPQ9Y2Y0 163 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 KPNA6O60684 536 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 CCNE1P24864 410 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 CASP7P55210 303 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 ARID5AQ03989 594 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 CNGA2Q16280 664 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 DEPDC1Q5TB30 811 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 METTL21CQ5VZV1 264 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 NOP9Q86U38 636 aaKnown RBP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 VPS36Q86VN1 386 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 ANKS1AQ92625 1134 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 NXPE3Q969Y0 559 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 FAM136AQ96C01 138 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 NSMCE3Q96MG7 304 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 MLXIPLQ9NP71 852 aa10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 UTP11Q9Y3A2 253 aaKnown RBP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 NOC2LQ9Y3T9 749 aaKnown RBP10.97□□□□□ -0.65
EFCAB11-208ENST00000555872 GTPBP10A4D1E9 387 aaKnown RBP10.96□□□□□ -0.65
EFCAB11-208ENST00000555872 PGRMC1O00264 195 aaKnown RBP10.96□□□□□ -0.65
EFCAB11-208ENST00000555872 PLSCR1O15162 318 aa10.96□□□□□ -0.65
EFCAB11-208ENST00000555872 SERPINB7O75635 380 aa10.96□□□□□ -0.65
EFCAB11-208ENST00000555872 RHOBTB3O94955 611 aa10.96□□□□□ -0.65
EFCAB11-208ENST00000555872 UNC5CO95185 931 aa10.96□□□□□ -0.65
EFCAB11-208ENST00000555872 BAG3O95817 575 aa10.96□□□□□ -0.65
EFCAB11-208ENST00000555872 CCNB1P14635 433 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms