RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 BICD1Q96G01 975 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 RBM15Q96T37 977 aaKnown RBP eCLIP18.91■□□□□ 0.627e-9■■■■□ 24.7
RCCD1-204ENST00000555737 MKNK1Q9BUB5 465 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 FAM198AQ9UFP1 575 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 ZNF148Q9UQR1 794 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 HARSP12081 509 aaKnown RBP18.91■□□□□ 0.62
RCCD1-204ENST00000555737 GYS1P13807 737 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 DYNLT1P63172 113 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 NOP14P78316 857 aaKnown RBP18.91■□□□□ 0.62
RCCD1-204ENST00000555737 ARHGEF18Q6ZSZ5 1173 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 TRMT10CQ7L0Y3 403 aaKnown RBP18.91■□□□□ 0.62
RCCD1-204ENST00000555737 L3MBTL3Q96JM7 780 aaPredicted RBP18.91■□□□□ 0.62
RCCD1-204ENST00000555737 TEKT3Q9BXF9 490 aa18.91■□□□□ 0.62
RCCD1-204ENST00000555737 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
RCCD1-204ENST00000555737 ENTPD5O75356 428 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 MFAP3P55082 362 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 RC3H1Q5TC82 1133 aaKnown RBP18.9■□□□□ 0.62
RCCD1-204ENST00000555737 TTC8Q8TAM2 541 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 EBF2Q9HAK2 575 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 METTL5Q9NRN9 209 aaKnown RBP18.9■□□□□ 0.62
RCCD1-204ENST00000555737 CFHP08603 1231 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 SEPT7Q16181 437 aaKnown RBP18.9■□□□□ 0.62
RCCD1-204ENST00000555737 BTNL9Q6UXG8 535 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 FMNL3Q8IVF7 1028 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 PPP1R12CQ9BZL4 782 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 COA1Q9GZY4 146 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 RXFP1Q9HBX9 757 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 DMAC2Q9NW81 257 aa18.9■□□□□ 0.62
RCCD1-204ENST00000555737 NOCTQ9UK39 431 aaKnown RBP18.9■□□□□ 0.62
RCCD1-204ENST00000555737 ATP5DP30049 168 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 PKN2Q16513 984 aaKnown RBP18.89■□□□□ 0.62
RCCD1-204ENST00000555737 SNRNP35Q16560 246 aaKnown RBP18.89■□□□□ 0.62
RCCD1-204ENST00000555737 GNPTABQ3T906 1256 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 XKR9Q5GH70 373 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 SERPINB12Q96P63 405 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 RPS6KC1Q96S38 1066 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 CCDC77Q9BR77 488 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 PLVAPQ9BX97 442 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 TUFT1Q9NNX1 390 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 NPHS2Q9NP85 383 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 NYAP2Q9P242 653 aa18.89■□□□□ 0.62
RCCD1-204ENST00000555737 XIRP1Q702N8 1843 aaKnown RBP18.89■□□□□ 0.61
RCCD1-204ENST00000555737 TP73O15350 636 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 CCND1P24385 295 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 WDR4P57081 412 aaKnown RBP18.89■□□□□ 0.61
RCCD1-204ENST00000555737 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 LONP2Q86WA8 852 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 LRRC37BQ96QE4 947 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 KIAA1683Q9H0B3 1180 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.89■□□□□ 0.61
RCCD1-204ENST00000555737 PHTF1Q9UMS5 762 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 PLIN4Q96Q06 1357 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 EME2A4GXA9 379 aaPredicted RBP18.89■□□□□ 0.61
RCCD1-204ENST00000555737 IL9RQ01113 521 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 TMEM179Q6ZVK1 233 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 CYFIP1Q7L576 1253 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 IL31RAQ8NI17 732 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 ZBTB10Q96DT7 871 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 AGBL1Q96MI9 1066 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 ACCSQ96QU6 501 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 NUDCD1Q96RS6 583 aa18.89■□□□□ 0.61
RCCD1-204ENST00000555737 FHDC1Q9C0D6 1143 aaPredicted RBP18.89■□□□□ 0.61
RCCD1-204ENST00000555737 TAC1P20366 129 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 STRN3Q13033 797 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 EAPPQ56P03 285 aaPredicted RBP18.88■□□□□ 0.61
RCCD1-204ENST00000555737 MOXD1Q6UVY6 613 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 NT5C1BQ96P26 610 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 OSBPL1AQ9BXW6 950 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 ZHX2Q9Y6X8 837 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 A0A1W2PPM1 405 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 PLS3P13797 630 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 EIF2AK2P19525 551 aaKnown RBP18.88■□□□□ 0.61
RCCD1-204ENST00000555737 ZNF394Q53GI3 561 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 ZBED8Q8IZ13 594 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 MAGEC3Q8TD91 643 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 DTX3LQ8TDB6 740 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 MKL1Q969V6 931 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 SAE1Q9UBE0 346 aaPredicted RBP18.88■□□□□ 0.61
RCCD1-204ENST00000555737 SUGT1Q9Y2Z0 365 aa18.88■□□□□ 0.61
RCCD1-204ENST00000555737 TNRC6CQ9HCJ0 1690 aaKnown RBP18.88■□□□□ 0.61
RCCD1-204ENST00000555737 ITIH2P19823 946 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 RPA3P35244 121 aaPredicted RBP18.87■□□□□ 0.61
RCCD1-204ENST00000555737 HHATQ5VTY9 493 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 CROCCP2Q86T23 111 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 ANKLE1Q8NAG6 615 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 CD101Q93033 1021 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 FAM213AQ9BRX8 229 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 ROPN1BQ9BZX4 212 aaPredicted RBP18.87■□□□□ 0.61
RCCD1-204ENST00000555737 ROPN1Q9HAT0 212 aaPredicted RBP18.87■□□□□ 0.61
RCCD1-204ENST00000555737 UBN1Q9NPG3 1134 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 MYH11P35749 1972 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 A0A0G2JND7 137 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 DGKZQ13574 1117 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 UTP4Q969X6 686 aaKnown RBP18.87■□□□□ 0.61
RCCD1-204ENST00000555737 ALAS1P13196 640 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 TCF4P15884 667 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 MAGEA4P43358 317 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 TAS2R40P59535 323 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 CCDC6Q16204 474 aa18.87■□□□□ 0.61
RCCD1-204ENST00000555737 LRRC8CQ8TDW0 803 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms