RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GPAA1O43292 621 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 MMP1P03956 469 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CALM1P0DP23 149 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CALM2P0DP24 149 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CALM3P0DP25 149 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 TAL1P17542 331 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 OAS2P29728 719 aaKnown RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 ADD2P35612 726 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CTSKP43235 329 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 TRAPPC10P48553 1259 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CKAP4Q07065 602 aaKnown RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 NR1I3Q14994 352 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 NAALADL2Q58DX5 795 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 RALGPS1Q5JS13 557 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CCDC70Q6NSX1 233 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 WDR93Q6P2C0 686 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 SHC4Q6S5L8 630 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 RASGRP2Q7LDG7 609 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 TC2NQ8N9U0 490 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CCDC148Q8NFR7 591 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 SYTL5Q8TDW5 730 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 LPIN2Q92539 896 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 OSBP2Q969R2 916 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 TCTN2Q96GX1 697 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 FTOQ9C0B1 505 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 ADAMTS10Q9H324 1103 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 RC3H2Q9HBD1 1191 aaKnown RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 GNL3LQ9NVN8 582 aaKnown RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 FANCLQ9NW38 375 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 GFOD1Q9NXC2 390 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 AATFQ9NY61 560 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 EBF1Q9UH73 591 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 OGDHLQ9ULD0 1010 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 ZNF281Q9Y2X9 895 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 NFE2L3Q9Y4A8 694 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 ZNF451Q9Y4E5 1061 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 PCDHA5Q9Y5H7 936 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 SRPRBQ9Y5M8 271 aaKnown RBP6.55□□□□□ -1.36
VPS33B-203ENST00000554264 CUL9Q8IWT3 2517 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 MGAMO43451 1857 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 LAMA3Q16787 3333 aa6.55□□□□□ -1.36
VPS33B-203ENST00000554264 SYNRGQ9UMZ2 1314 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 CTAGE15A4D2H0 777 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 BIN1O00499 593 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 SIGLEC6O43699 453 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 CTAGE8P0CG41 777 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 PRDX5P30044 214 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 ACTN2P35609 894 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 IRAK1P51617 712 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 ANTXR2P58335 489 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 GUCY1B3Q02153 619 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 EGR3Q06889 387 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 ZSCAN26Q16670 478 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 LONRF2Q1L5Z9 754 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 CLEC16AQ2KHT3 1053 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 MAP3K21Q5TCX8 1036 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 CYP26C1Q6V0L0 522 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 CTAGE6Q86UF2 777 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 ZFPM1Q8IX07 1006 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 CTAGE4Q8IX94 777 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 DAGLBQ8NCG7 672 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 NOC3LQ8WTT2 800 aaKnown RBP6.54□□□□□ -1.36
VPS33B-203ENST00000554264 NAPGQ99747 312 aaPredicted RBP6.54□□□□□ -1.36
VPS33B-203ENST00000554264 RNF26Q9BY78 433 aaPredicted RBP6.54□□□□□ -1.36
VPS33B-203ENST00000554264 FUT8Q9BYC5 575 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 PARD6BQ9BYG5 372 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 RBM28Q9NW13 759 aaKnown RBP6.54□□□□□ -1.36
VPS33B-203ENST00000554264 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS33B-203ENST00000554264 GJD2Q9UKL4 321 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 MAN1B1Q9UKM7 699 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 FBXL21Q9UKT6 434 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 DENND2AQ9ULE3 1009 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 PCDHB12Q9Y5F1 795 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 MYH13Q9UKX3 1938 aa6.54□□□□□ -1.36
VPS33B-203ENST00000554264 GAKO14976 1311 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 PFASO15067 1338 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 ALPK3Q96L96 1907 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 ANO9A1A5B4 782 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 LRRC10BA6NIK2 292 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 KIF28PB7ZC32 967 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 MEIS1O00470 390 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 MFAP3LO75121 409 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 SSBP05455 408 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS33B-203ENST00000554264 COL6A1P12109 1028 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 ATP1A3P13637 1013 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 CYP2B6P20813 491 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 AARSP49588 968 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS33B-203ENST00000554264 HNRNPH2P55795 449 aaKnown RBP6.53□□□□□ -1.36
VPS33B-203ENST00000554264 TIMM10P62072 90 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 AKAP17AQ02040 695 aaKnown RBP6.53□□□□□ -1.36
VPS33B-203ENST00000554264 TEKQ02763 1124 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 ITIH3Q06033 890 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 MAP3K12Q12852 859 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 PNOCQ13519 176 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 NTRK3Q16288 839 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 GNPTABQ3T906 1256 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 TMEM67Q5HYA8 995 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms