RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 PLEKHA5Q9HAU0 1116 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 RGS18Q9NS28 235 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 HES2Q9Y543 173 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
CACNB3-216ENST00000550391 CITO14578 2027 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 PTPRJQ12913 1337 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 ITIH6Q6UXX5 1313 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 TTC26A0AVF1 554 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 GTPBP10A4D1E9 387 aaKnown RBP15.27■□□□□ 0.04
CACNB3-216ENST00000550391 LACTBL1A8MY62 500 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 ZNF623O75123 536 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 TIMP1P01033 207 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 SKIP12755 728 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 TNNI1P19237 187 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 ITGB8P26012 769 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 RFC2P35250 354 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 GCLMP48507 274 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 RAB27AP51159 221 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 YARSP54577 528 aaKnown RBP15.27■□□□□ 0.04
CACNB3-216ENST00000550391 MYL7Q01449 175 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 CETN1Q12798 172 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 SYCP1Q15431 976 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 PTPN21Q16825 1174 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 CBWD6Q4V339 395 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 CBWD3Q5JTY5 395 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 CBWD5Q5RIA9 395 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 SPECC1LQ69YQ0 1117 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 GBP6Q6ZN66 633 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 MRPL10Q7Z7H8 261 aaKnown RBP15.27■□□□□ 0.04
CACNB3-216ENST00000550391 RTN4RL1Q86UN2 441 aaPredicted RBP15.27■□□□□ 0.04
CACNB3-216ENST00000550391 WDR49Q8IV35 697 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 CD302Q8IX05 232 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 DBF4BQ8NFT6 615 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 LINC01599Q8WXQ3 324 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 SEPT8Q92599 483 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 ZNF516Q92618 1163 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 PPP1R9BQ96SB3 815 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 ASB7Q9H672 318 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 MMRN2Q9H8L6 949 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.04
CACNB3-216ENST00000550391 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
CACNB3-216ENST00000550391 A0A0U1RQF3 1178 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 RECQL4O94761 1208 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 MXI1P50539 228 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 KCNMA1Q12791 1236 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 KRT39Q6A163 491 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 C15orf39Q6ZRI6 1047 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 TMC6Q7Z403 805 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 PCMTD1Q96MG8 357 aaPredicted RBP15.26■□□□□ 0.03
CACNB3-216ENST00000550391 TSPAN18Q96SJ8 248 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 LRFN3Q9BTN0 628 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 TMEM117Q9H0C3 514 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 PRDM5Q9NQX1 630 aaPredicted RBP15.26■□□□□ 0.03
CACNB3-216ENST00000550391 IMPACTQ9P2X3 320 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 SIK3Q9Y2K2 1263 aa15.26■□□□□ 0.03
CACNB3-216ENST00000550391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.26■□□□□ 0.03
CACNB3-216ENST00000550391 PDCD11Q14690 1871 aaKnown RBP15.25■□□□□ 0.03
CACNB3-216ENST00000550391 LTBP2Q14767 1821 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 GOLGA6L6A8MZA4 724 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 C9IYK1 514 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
CACNB3-216ENST00000550391 ITGA4P13612 1032 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 RAG1P15918 1043 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 AKAP5P24588 427 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 FAM189BP81408 668 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 EXOC3L4Q17RC7 722 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 TCTN1Q2MV58 587 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 XKR4Q5GH76 650 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 LMBRD2Q68DH5 695 aaPredicted RBP15.25■□□□□ 0.03
CACNB3-216ENST00000550391 SLC24A5Q71RS6 500 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 SV2AQ7L0J3 742 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 NT5DC4Q86YG4 428 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 EFCAB13Q8IY85 973 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 SPC24Q8NBT2 197 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 OR5B17Q8NGF7 314 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 CACTINQ8WUQ7 758 aaKnown RBP15.25■□□□□ 0.03
CACNB3-216ENST00000550391 PGBD4Q96DM1 585 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 VWCEQ96DN2 955 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 CRACR2AQ9BSW2 395 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 NUP58Q9BVL2 599 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 APOL6Q9BWW8 343 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
CACNB3-216ENST00000550391 C1orf112Q9NSG2 853 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 PARP2Q9UGN5 583 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 DERAQ9Y315 318 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 COQ4Q9Y3A0 265 aa15.25■□□□□ 0.03
CACNB3-216ENST00000550391 TNNC2P02585 160 aa15.24■□□□□ 0.03
CACNB3-216ENST00000550391 NFICP08651 508 aa15.24■□□□□ 0.03
CACNB3-216ENST00000550391 ATF7P17544 494 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-216ENST00000550391 KLK7P49862 253 aa15.24■□□□□ 0.03
CACNB3-216ENST00000550391 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
CACNB3-216ENST00000550391 ZACNQ401N2 412 aa15.24■□□□□ 0.03
CACNB3-216ENST00000550391 EPC2Q52LR7 807 aa15.24■□□□□ 0.03
CACNB3-216ENST00000550391 JADE1Q6IE81 842 aa15.24■□□□□ 0.03
CACNB3-216ENST00000550391 MFSD5Q6N075 450 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms