RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 CUL3Q13618 768 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 SPARCL1Q14515 664 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 MUM1Q2TAK8 710 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 CBWD6Q4V339 395 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 CBWD3Q5JTY5 395 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 CBWD5Q5RIA9 395 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 TRABD2AQ86V40 505 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 SLC9A9Q8IVB4 645 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 LRRC8CQ8TDW0 803 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 NCSTNQ92542 709 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 MMADHCQ9H3L0 296 aaPredicted RBP12.99□□□□□ -0.33
ATXN2-216ENST00000546483 PPCSQ9HAB8 311 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 PIDD1Q9HB75 910 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 SPON1Q9HCB6 807 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 DLGAP2Q9P1A6 1054 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 PDP2Q9P2J9 529 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
ATXN2-216ENST00000546483 FOXN3O00409 490 aaPredicted RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 IRF6O14896 467 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 P4HA2O15460 535 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ZWINTO95229 277 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 CHRNB2P17787 502 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 CHRNA5P30532 468 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 PTGER2P43116 358 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 KCNJ1P48048 391 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 PSMC6P62333 389 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 LAMB3Q13751 1172 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 TBC1D25Q3MII6 688 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 Q4G0T1 1027 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 PHLDB3Q6NSJ2 640 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 SRRM1Q8IYB3 904 aaKnown RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 POLR3CQ9BUI4 534 aaPredicted RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 TRIM4Q9C037 500 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 SSU72Q9NP77 194 aaKnown RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 UVRAGQ9P2Y5 699 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 MAGEA13PA6NCF6 341 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 RASA4BC9J798 803 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 PPEF1O14829 653 aaPredicted RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ZBTB5O15062 677 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 RASA4O43374 803 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 TBCAO75347 108 aaKnown RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ENTPD5O75356 428 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 TJP3O95049 919 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 GCNT3O95395 438 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 RFC5P40937 340 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 PSMC4P43686 418 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ITGA8P53708 1063 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ZRSR2Q15696 482 aaKnown RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ZNF804AQ7Z570 1209 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ARHGAP18Q8N392 663 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 ATL2Q8NHH9 583 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 TTC8Q8TAM2 541 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 EZH1Q92800 747 aaPredicted RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 NR1H4Q96RI1 486 aaPredicted RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 DDX43Q9NXZ2 648 aaKnown RBP12.98□□□□□ -0.33
ATXN2-216ENST00000546483 SEL1LQ9UBV2 794 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 GTF3C4Q9UKN8 822 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 SLC4A7Q9Y6M7 1214 aa12.98□□□□□ -0.33
ATXN2-216ENST00000546483 FRMPD2Q68DX3 1309 aaPredicted RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 CLIC2O15247 247 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 PMM2O15305 246 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 GAS8O95995 478 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 MCCD1P59942 119 aaPredicted RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 MYL7Q01449 175 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 PABPC4Q13310 644 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 AP3B2Q13367 1082 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 MESDQ14696 234 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 KPNB1Q14974 876 aaKnown RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 SGO2Q562F6 1265 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 ZC3H12AQ5D1E8 599 aaKnown RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 GPATCH4Q5T3I0 446 aaKnown RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 SNX30Q5VWJ9 437 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 FAM47EQ6ZV65 393 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 ANKS1BQ7Z6G8 1248 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 PTPRN2Q92932 1015 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 EPAS1Q99814 870 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 DMAP1Q9NPF5 467 aaPredicted RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 ASIC3Q9UHC3 531 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 CCDC22O60826 627 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 STAT3P40763 770 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 TGFB2P61812 414 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 CENPCQ03188 943 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 SLC34A1Q06495 639 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 KCNA1Q09470 495 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 DNAJC3Q13217 504 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 KHDC1Q4VXA5 237 aaKnown RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 RNF220Q5VTB9 566 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 FOXB2Q5VYV0 432 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 ARHGAP22Q7Z5H3 698 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 SLC20A1Q8WUM9 679 aa12.97□□□□□ -0.33
ATXN2-216ENST00000546483 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
ATXN2-216ENST00000546483 FGD4Q96M96 766 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms