RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
MRPS35-204ENST00000542199 TMPRSS11EQ9UL52 423 aa10.17□□□□□ -0.78
MRPS35-204ENST00000542199 ABCC4O15439 1325 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 A0A1B0GTL3 188 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 PAX4O43316 350 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 PCDH8O95206 1070 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 PFKMP08237 780 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 ZNF28P17035 718 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 SRSF2Q01130 221 aaKnown RBP10.16□□□□□ -0.78
MRPS35-204ENST00000542199 MCL1Q07820 350 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 TRIM25Q14258 630 aaKnown RBP10.16□□□□□ -0.78
MRPS35-204ENST00000542199 LYSMD2Q8IV50 215 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 WDR48Q8TAF3 677 aa10.16□□□□□ -0.78
MRPS35-204ENST00000542199 SH3TC1Q8TE82 1336 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 SHTN1A0MZ66 631 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 NPIPB6E9PJ23 425 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.78
MRPS35-204ENST00000542199 KCNA10Q16322 511 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 UGT8Q16880 541 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.15□□□□□ -0.78
MRPS35-204ENST00000542199 TOR2AQ5JU69 321 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 DPP8Q6V1X1 898 aaPredicted RBP10.15□□□□□ -0.78
MRPS35-204ENST00000542199 GPC2Q8N158 579 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 OR5AN1Q8NGI8 311 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 PLBD2Q8NHP8 589 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 DACT3Q96B18 629 aaPredicted RBP10.15□□□□□ -0.78
MRPS35-204ENST00000542199 ISCA1Q9BUE6 129 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 KCTD10Q9H3F6 313 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 TAF1DQ9H5J8 278 aaPredicted RBP10.15□□□□□ -0.78
MRPS35-204ENST00000542199 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 TRMT112Q9UI30 125 aaKnown RBP10.15□□□□□ -0.78
MRPS35-204ENST00000542199 DENND2AQ9ULE3 1009 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 ATP6V0A2Q9Y487 856 aa10.15□□□□□ -0.78
MRPS35-204ENST00000542199 COL4A5P29400 1685 aa10.15□□□□□ -0.79
MRPS35-204ENST00000542199 CACNA1SQ13698 1873 aa10.15□□□□□ -0.79
MRPS35-204ENST00000542199 MYPNQ86TC9 1320 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 FFAR3O14843 346 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PCDHGA12O60330 932 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 BBOX1O75936 387 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 BCAR1P56945 870 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 GNAI1P63096 354 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 ZNF124Q15973 351 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 ZBTB46Q86UZ6 589 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 FAXDC2Q96IV6 333 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PITHD1Q9GZP4 211 aaPredicted RBP10.14□□□□□ -0.79
MRPS35-204ENST00000542199 DNAJC28Q9NX36 388 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 KCNG1Q9UIX4 513 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 CDC42EP3Q9UKI2 254 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PCDHGA9Q9Y5G4 932 aaKnown RBP10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PCDHGA8Q9Y5G5 932 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PCDHGA7Q9Y5G6 932 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PCDHGA6Q9Y5G7 932 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PCDHGA3Q9Y5H0 932 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PCDHGA2Q9Y5H1 932 aa10.14□□□□□ -0.79
MRPS35-204ENST00000542199 PASKQ96RG2 1323 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 TRIM75PA6NK02 468 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 H0Y858 1186 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 RFXAPO00287 272 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 DDX3XO00571 662 aaKnown RBP eCLIP10.13□□□□□ -0.798e-24■■■■■ 26.9
MRPS35-204ENST00000542199 OPHN1O60890 802 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 RBP3P10745 1247 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 RPL13P26373 211 aaKnown RBP10.13□□□□□ -0.79
MRPS35-204ENST00000542199 ANTXR2P58335 489 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 NFATC3Q12968 1075 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 CLUL1Q15846 466 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 VMACQ2NL98 169 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 CCDC184Q52MB2 194 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 GRAMD4Q6IC98 578 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 BCL6BQ8N143 479 aaPredicted RBP10.13□□□□□ -0.79
MRPS35-204ENST00000542199 NUDT10Q8NFP7 164 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 CHMP4CQ96CF2 233 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 HOOK2Q96ED9 719 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 NUDT11Q96G61 164 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 SPATA25Q9BR10 227 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 RTFDC1Q9BY42 306 aaPredicted RBP10.13□□□□□ -0.79
MRPS35-204ENST00000542199 VPS33BQ9H267 617 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 MKS1Q9NXB0 559 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 HACL1Q9UJ83 578 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 USP18Q9UMW8 372 aa10.13□□□□□ -0.79
MRPS35-204ENST00000542199 TCERG1O14776 1098 aaKnown RBP10.12□□□□□ -0.79
MRPS35-204ENST00000542199 KLHL18O94889 574 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 OSMP13725 252 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 EPHX2P34913 555 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 ZEB1P37275 1124 aaPredicted RBP10.12□□□□□ -0.79
MRPS35-204ENST00000542199 LGALS4P56470 323 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 PPARAQ07869 468 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 GRAPQ13588 217 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 ZNF385BQ569K4 471 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 CXXC5Q7LFL8 322 aaKnown RBP10.12□□□□□ -0.79
MRPS35-204ENST00000542199 OTOP2Q7RTS6 562 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 SP8Q8IXZ3 490 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 AMOTL1Q8IY63 956 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 GRAPLQ8TC17 118 aaPredicted RBP10.12□□□□□ -0.79
MRPS35-204ENST00000542199 METTL14Q9HCE5 456 aaKnown RBP10.12□□□□□ -0.79
MRPS35-204ENST00000542199 AASDHPPTQ9NRN7 309 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 KCMF1Q9P0J7 381 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 NTMQ9P121 344 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 FTSJ1Q9UET6 329 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 NUMBLQ9Y6R0 609 aa10.12□□□□□ -0.79
MRPS35-204ENST00000542199 SCN4AP35499 1836 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms