RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 GRAMD1CQ8IYS0 662 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 PGBD4Q96DM1 585 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 ARPC5LQ9BPX5 153 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 ANLNQ9NQW6 1124 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 CHST12Q9NRB3 414 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 HDAC5Q9UQL6 1122 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 REXO2Q9Y3B8 237 aaKnown RBP5.22□□□□□ -1.57
SNHG1-217ENST00000541578 GPR45Q9Y5Y3 372 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 TOPBP1Q92547 1522 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 AQRO60306 1485 aaKnown RBP eCLIP5.21□□□□□ -1.583e-14■■■■■ 46.6
SNHG1-217ENST00000541578 ANO9A1A5B4 782 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 IFRD1O00458 451 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCDHGA12O60330 932 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 SLPIP03973 132 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 OSMP13725 252 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 HMGA2P52926 109 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 SRSF2Q01130 221 aaKnown RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 KIF23Q02241 960 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 MORC3Q14149 939 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 DHX8Q14562 1220 aaKnown RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.21□□□□□ -1.582e-6■■■■■ 41.6
SNHG1-217ENST00000541578 GRAMD1BQ3KR37 738 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 DCAF17Q5H9S7 520 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 C1QL3Q5VWW1 255 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 FAM83AQ86UY5 434 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 GLB1L3Q8NCI6 653 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 ZNF483Q8TF39 744 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 SNX33Q8WV41 574 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 ELAC2Q9BQ52 826 aaKnown RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PDCD2LQ9BRP1 358 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 MRIQ9BWK5 157 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCED1AQ9H1Q7 454 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 DPP7Q9UHL4 492 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 INTUQ9ULD6 942 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 EDARQ9UNE0 448 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 DAAM1Q9Y4D1 1078 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCDHGA9Q9Y5G4 932 aaKnown RBP5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCDHGA8Q9Y5G5 932 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCDHGA7Q9Y5G6 932 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCDHGA6Q9Y5G7 932 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCDHGA3Q9Y5H0 932 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 PCDHGA2Q9Y5H1 932 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 WDR97A6NE52 1622 aa5.21□□□□□ -1.58
SNHG1-217ENST00000541578 HK1P19367 917 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 CTSSP25774 331 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 ADKP55263 362 aaKnown RBP5.2□□□□□ -1.58
SNHG1-217ENST00000541578 MRPS9P82933 396 aaKnown RBP5.2□□□□□ -1.58
SNHG1-217ENST00000541578 SLC25A3Q00325 362 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 KLF10Q13118 480 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 RABL3Q5HYI8 236 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 METTL24Q5JXM2 366 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 FNDC7Q5VTL7 733 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 NAIF1Q69YI7 327 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-217ENST00000541578 ABHD15Q6UXT9 468 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 CCDC149Q6ZUS6 474 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 SRGAP1Q7Z6B7 1085 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 PPM1NQ8N819 430 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 SLC35G2Q8TBE7 412 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 JADE3Q92613 823 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 CDC5LQ99459 802 aaKnown RBP5.2□□□□□ -1.58
SNHG1-217ENST00000541578 MMRN2Q9H8L6 949 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 RPTORQ8N122 1335 aa5.2□□□□□ -1.58
SNHG1-217ENST00000541578 SH3BP5O60239 455 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 FAM20BO75063 409 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 TMEM127O75204 238 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 NDUFS2O75306 463 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 GASTP01350 101 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 MAKP20794 623 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 AGXTP21549 392 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 CDK17Q00537 523 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 APBA1Q02410 837 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 FHL2Q14192 279 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 C4orf46Q504U0 113 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 CCDC157Q569K6 752 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 DOK3Q7L591 496 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 MORC1Q86VD1 984 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 ENAHQ8N8S7 591 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-217ENST00000541578 OR52N2Q8NGI0 321 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 AUTS2Q8WXX7 1259 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 FAM193BQ96PV7 902 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-217ENST00000541578 SLC2A4RGQ9NR83 387 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 TRPS1Q9UHF7 1281 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 DDX20Q9UHI6 824 aaKnown RBP5.19□□□□□ -1.58
SNHG1-217ENST00000541578 ING1Q9UK53 422 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-217ENST00000541578 CLCA2Q9UQC9 943 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 DNMBPQ6XZF7 1577 aa5.19□□□□□ -1.58
SNHG1-217ENST00000541578 SOGA1O94964 1423 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 PRR5-ARHGAP8B1AHC4 643 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 APAF1O14727 1248 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 PMM2O15305 246 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 RECQL4O94761 1208 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 ADH4P08319 380 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 MYL3P08590 195 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 ZNF267Q14586 743 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-217ENST00000541578 C1orf228Q6PIY5 440 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 FAM180AQ6UWF9 173 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 BTNL9Q6UXG8 535 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 PDZD4Q76G19 769 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-217ENST00000541578 PAF1Q8N7H5 531 aa5.18□□□□□ -1.58
SNHG1-217ENST00000541578 ZBTB34Q8NCN2 500 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms