RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 IKBKEQ14164 716 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ENOX2Q16206 610 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MIIPQ5JXC2 388 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CRELD2Q6UXH1 353 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FAM43BQ6ZT52 329 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 WDR49Q8IV35 697 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ABI1Q8IZP0 508 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 BEST2Q8NFU1 509 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FAM193BQ96PV7 902 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SPAG5Q96R06 1193 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NXF3Q9H4D5 531 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 LUC7L2Q9Y383 392 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 HES2Q9Y543 173 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 IPPQ9Y573 584 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PCDHB7Q9Y5E2 793 aa11.52□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TANC1Q9C0D5 1861 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GTPBP10A4D1E9 387 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RBAK-RBAKDNI3L0D1 243 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EVI5O60447 810 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RECQL4O94761 1208 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TIMP1P01033 207 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 USP8P40818 1118 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RBL2Q08999 1139 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RAPGEF1Q13905 1077 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 JADE1Q6IE81 842 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SLC24A5Q71RS6 500 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SV2AQ7L0J3 742 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CCDC186Q7Z3E2 898 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 C7orf61Q8IZ16 206 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EHBP1Q8NDI1 1231 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FBXL13Q8NEE6 735 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DBF4BQ8NFT6 615 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 URGCPQ8TCY9 931 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 BORCS6Q96GS4 357 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NT5C1BQ96P26 610 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ERGIC2Q96RQ1 377 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 INTS2Q9H0H0 1204 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.51□□□□□ -0.573e-10■■■■■ 130.4
TNFRSF1A-211ENST00000538363 INTS13Q9NVM9 706 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 INPP5FQ9Y2H2 1132 aa11.51□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ABLIM1O14639 778 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 OFD1O75665 1012 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 P4HA1P13674 534 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ATF7P17544 494 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SLC9A1P19634 815 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MFAP3P55082 362 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 POLR2FP61218 127 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RBP5P82980 135 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MYO1EQ12965 1108 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SGSM1Q2NKQ1 1148 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SLC10A6Q3KNW5 377 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UBXN11Q5T124 520 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 APTXQ7Z2E3 356 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TRAPPC11Q7Z392 1133 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NT5DC4Q86YG4 428 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CNGA4Q8IV77 575 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TMEM192Q8IY95 271 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 FAM81BQ96LP2 452 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TSPAN18Q96SJ8 248 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 LBHD1Q9BQE6 289 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 MTMR12Q9C0I1 747 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 TMEM117Q9H0C3 514 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UBE2TQ9NPD8 197 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NLRC4Q9NPP4 1024 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RGS18Q9NS28 235 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 RAB20Q9NX57 234 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DPP3Q9NY33 737 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UBQLN1Q9UMX0 589 aaKnown RBP11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GIT1Q9Y2X7 761 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 DERAQ9Y315 318 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 UMODL1Q5DID0 1318 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ITIH6Q6UXX5 1313 aa11.5□□□□□ -0.57
TNFRSF1A-211ENST00000538363 A0A0U1RQF3 1178 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NBNO60934 754 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 EOMESO95936 686 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 HLA-DRAP01903 254 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 THP07101 528 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NFICP08651 508 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CCDC172P0C7W6 258 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 PON1P27169 355 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CASP14P31944 242 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KRT9P35527 623 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KCNJ6P48051 423 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 KLK7P49862 253 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ADKP55263 362 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 NCOA4Q13772 614 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 ARHGAP44Q17R89 818 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CBWD6Q4V339 395 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CBWD3Q5JTY5 395 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
TNFRSF1A-211ENST00000538363 CBWD5Q5RIA9 395 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms