RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 SLC4A4Q9Y6R1 1079 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZHX2Q9Y6X8 837 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ARAP2Q8WZ64 1704 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRPM7Q96QT4 1865 aa2.99□□□□□ -1.93
TNFRSF1A-210ENST00000537842 DOCK3Q8IZD9 2030 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SIPA1L1O43166 1804 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TTC41PQ6P2S7 1318 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ADGRA2Q96PE1 1338 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PAPPA2Q9BXP8 1791 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CCL15-CCL14A0A0B4J2E2 113 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 IGKV6D-41A0A0C4DH26 115 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 A0A0G2JLL6 359 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRIM75PA6NK02 468 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CA12O43570 354 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 BRINP1O60477 761 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 DLX3O60479 287 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NMT2O60551 498 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PPFIA4O75335 1185 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CNMDO75829 334 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NPTXRO95502 500 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 BAG3O95817 575 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CPP00450 1065 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NTRK1P04629 796 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CAPNS1P04632 268 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 HSPD1P10809 573 aaKnown RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FGFR1P11362 822 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 VCAM1P19320 739 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 POU3F3P20264 500 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CHMLP26374 656 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CASP2P42575 452 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CTCFP49711 727 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CDKN1CP49918 316 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SUMO1P63165 101 aaKnown RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SRSF3P84103 164 aaKnown RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MAP2K1Q02750 393 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PPATQ06203 517 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CYP4F3Q08477 520 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PPIL2Q13356 520 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TNFAIP1Q13829 316 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MORC3Q14149 939 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SEPT2Q15019 361 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SART3Q15020 963 aaKnown RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NR0B2Q15466 257 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CCL15Q16663 113 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FAM47AQ5JRC9 791 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TTC22Q5TAA0 569 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 DENND5AQ6IQ26 1287 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CCDC70Q6NSX1 233 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 C17orf99Q6UX52 265 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 RPTNQ6XPR3 784 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SYDE1Q6ZW31 735 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CEP68Q76N32 757 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NECAB2Q7Z6G3 386 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PRRT2Q7Z6L0 340 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 RNF180Q86T96 592 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZBTB46Q86UZ6 589 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ERO1BQ86YB8 467 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FOXP4Q8IVH2 680 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SCUBE1Q8IWY4 988 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 AMOTL1Q8IY63 956 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SCYL3Q8IZE3 742 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 IFNL3Q8IZI9 196 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PPM1KQ8N3J5 372 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 RCBTB1Q8NDN9 531 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ALG3Q92685 438 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CHMP4CQ96CF2 233 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SHISA4Q96DD7 197 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 IL17RAQ96F46 866 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CLUHP3Q96NS8 147 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 P2RX7Q99572 595 aaKnown RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SLC38A3Q99624 504 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 YIPF4Q9BSR8 244 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 FAM126AQ9BYI3 521 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CHMP4BQ9H444 224 aaKnown RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SP110Q9HB58 689 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ARNT2Q9HBZ2 717 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TXNRD2Q9NNW7 524 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TNFRSF12AQ9NP84 129 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 IL17RBQ9NRM6 502 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 AASDHPPTQ9NRN7 309 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ATP8A2Q9NTI2 1148 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SIRT5Q9NXA8 310 aa2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TIMM13Q9Y5L4 95 aaPredicted RBP2.98□□□□□ -1.93
TNFRSF1A-210ENST00000537842 TRIOO75962 3097 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 WDR87Q6ZQQ6 2873 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MANSC4A6NHS7 340 aaPredicted RBP2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PDHXO00330 501 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 CXCL11O14625 94 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 MSCO60682 206 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 DBHP09172 617 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 SRGAP2CP0DJJ0 459 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 ZBTB48P10074 688 aaPredicted RBP2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 PNLIPP16233 465 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 KRT15P19012 456 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 VIPR1P32241 457 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 NOVP48745 357 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 EPHB3P54753 998 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 HMGCS2P54868 508 aa2.97□□□□□ -1.93
TNFRSF1A-210ENST00000537842 BACE1P56817 501 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms