RNA–Protein interactions for RNA: ENST00000536196.1

CHFR-212, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 597 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-212ENST00000536196 OTOP3Q7RTS5 596 aa23.01■■□□□ 1.27
CHFR-212ENST00000536196 KREMEN2Q8NCW0 462 aa23.01■■□□□ 1.27
CHFR-212ENST00000536196 LNX1Q8TBB1 728 aaPredicted RBP23.01■■□□□ 1.27
CHFR-212ENST00000536196 PBXIP1Q96AQ6 731 aa23.01■■□□□ 1.27
CHFR-212ENST00000536196 CCSER1Q9C0I3 900 aa23.01■■□□□ 1.27
CHFR-212ENST00000536196 GOLGA2P5Q9HBQ8 144 aa23.01■■□□□ 1.27
CHFR-212ENST00000536196 KMT2EQ8IZD2 1858 aa23■■□□□ 1.27
CHFR-212ENST00000536196 TRAPPC3O43617 180 aa23■■□□□ 1.27
CHFR-212ENST00000536196 RFPL2O75678 378 aa23■■□□□ 1.27
CHFR-212ENST00000536196 KRT18P05783 430 aaKnown RBP23■■□□□ 1.27
CHFR-212ENST00000536196 SCP2P22307 547 aa23■■□□□ 1.27
CHFR-212ENST00000536196 MTMR3Q13615 1198 aa23■■□□□ 1.27
CHFR-212ENST00000536196 HAUS6Q7Z4H7 955 aa23■■□□□ 1.27
CHFR-212ENST00000536196 SMG7Q92540 1137 aaKnown RBP23■■□□□ 1.27
CHFR-212ENST00000536196 LARP4BQ92615 738 aaKnown RBP23■■□□□ 1.27
CHFR-212ENST00000536196 KCNN1Q92952 543 aa23■■□□□ 1.27
CHFR-212ENST00000536196 BICD1Q96G01 975 aa23■■□□□ 1.27
CHFR-212ENST00000536196 DDX27Q96GQ7 796 aaKnown RBP23■■□□□ 1.27
CHFR-212ENST00000536196 CLSTN3Q9BQT9 956 aa23■■□□□ 1.27
CHFR-212ENST00000536196 PARVGQ9HBI0 331 aa23■■□□□ 1.27
CHFR-212ENST00000536196 ZDHHC7Q9NXF8 308 aa23■■□□□ 1.27
CHFR-212ENST00000536196 CNTN3Q9P232 1028 aa23■■□□□ 1.27
CHFR-212ENST00000536196 CLDN3O15551 220 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 PAPLNO95428 1278 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 KCNE1P15382 129 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 FGFR3P22607 806 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 MATR3P43243 847 aaKnown RBP eCLIP22.99■■□□□ 1.27
CHFR-212ENST00000536196 ZNF131P52739 623 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 SOX4Q06945 474 aaPredicted RBP22.99■■□□□ 1.27
CHFR-212ENST00000536196 UBALD2Q8IYN6 164 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 MYCT1Q8N699 235 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 ZMAT2Q96NC0 199 aaKnown RBP22.99■■□□□ 1.27
CHFR-212ENST00000536196 FOXD4L1Q9NU39 408 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 LIMD1Q9UGP4 676 aa22.99■■□□□ 1.27
CHFR-212ENST00000536196 K7ENM7 598 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 TBCAO75347 108 aaKnown RBP22.98■■□□□ 1.27
CHFR-212ENST00000536196 MARCKSP29966 332 aaPredicted RBP22.98■■□□□ 1.27
CHFR-212ENST00000536196 MCL1Q07820 350 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 FAM173BQ6P4H8 233 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 STAMQ92783 540 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 ZNF707Q96C28 371 aaPredicted RBP22.98■■□□□ 1.27
CHFR-212ENST00000536196 EPSTI1Q96J88 318 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 KCNH6Q9H252 994 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 PIDD1Q9HB75 910 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 WDR6Q9NNW5 1121 aaKnown RBP22.98■■□□□ 1.27
CHFR-212ENST00000536196 CCDC39Q9UFE4 941 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 FBXO2Q9UK22 296 aaPredicted RBP22.98■■□□□ 1.27
CHFR-212ENST00000536196 FBXW11Q9UKB1 542 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 MTMR6Q9Y217 621 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 SRPRBQ9Y5M8 271 aaKnown RBP22.98■■□□□ 1.27
CHFR-212ENST00000536196 CLUHO75153 1309 aa22.98■■□□□ 1.27
CHFR-212ENST00000536196 PODXLO00592 558 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 ZMYND10O75800 440 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 ASGR2P07307 311 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 IGFBP6P24592 240 aaPredicted RBP22.97■■□□□ 1.27
CHFR-212ENST00000536196 SPECC1Q5M775 1068 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 CD300LGQ6UXG3 332 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 SUGP1Q8IWZ8 645 aaKnown RBP22.97■■□□□ 1.27
CHFR-212ENST00000536196 C3orf58Q8NDZ4 430 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 ASIC4Q96FT7 647 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 PRKD2Q9BZL6 878 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 ZHX3Q9H4I2 956 aa22.97■■□□□ 1.27
CHFR-212ENST00000536196 ANK1P16157 1881 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 TRAK2O60296 914 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 RPL9P32969 192 aaKnown RBP22.96■■□□□ 1.27
CHFR-212ENST00000536196 DDIT3P35638 169 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 TXLNAP40222 546 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 BRCC3P46736 316 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 LIG4P49917 911 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 CEBPZQ03701 1054 aaKnown RBP22.96■■□□□ 1.27
CHFR-212ENST00000536196 SLC10A6Q3KNW5 377 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 SEZ6Q53EL9 994 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 LIN9Q5TKA1 542 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 USP49Q70CQ1 688 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 FBXL6Q8N531 539 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 ZSCAN16Q9H4T2 348 aaPredicted RBP22.96■■□□□ 1.27
CHFR-212ENST00000536196 MTRRQ9UBK8 725 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 STK17AQ9UEE5 414 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 TBX20Q9UMR3 447 aa22.96■■□□□ 1.27
CHFR-212ENST00000536196 I3L4J1 428 aa22.95■■□□□ 1.26
CHFR-212ENST00000536196 HNRNPDLO14979 420 aaKnown RBP22.95■■□□□ 1.26
CHFR-212ENST00000536196 MEFVO15553 781 aaPredicted RBP22.95■■□□□ 1.26
CHFR-212ENST00000536196 STX6O43752 255 aa22.95■■□□□ 1.26
CHFR-212ENST00000536196 CLTAP09496 248 aa22.95■■□□□ 1.26
CHFR-212ENST00000536196 TKTP29401 623 aaKnown RBP22.95■■□□□ 1.26
CHFR-212ENST00000536196 ABCD1P33897 745 aa22.95■■□□□ 1.26
CHFR-212ENST00000536196 ANKS3Q6ZW76 656 aa22.95■■□□□ 1.26
CHFR-212ENST00000536196 C18orf25Q96B23 403 aaPredicted RBP22.95■■□□□ 1.26
CHFR-212ENST00000536196 HAPLN2Q9GZV7 340 aa22.95■■□□□ 1.26
CHFR-212ENST00000536196 PLEKHA5Q9HAU0 1116 aa22.95■■□□□ 1.26
CHFR-212ENST00000536196 ADAM12O43184 909 aa22.94■■□□□ 1.26
CHFR-212ENST00000536196 PIGRP01833 764 aa22.94■■□□□ 1.26
CHFR-212ENST00000536196 HNRNPA1P09651 372 aaKnown RBP eCLIP22.94■■□□□ 1.26
CHFR-212ENST00000536196 CXCL8P10145 99 aa22.94■■□□□ 1.26
CHFR-212ENST00000536196 GBP2P32456 591 aaPredicted RBP22.94■■□□□ 1.26
CHFR-212ENST00000536196 OR1D2P34982 312 aa22.94■■□□□ 1.26
CHFR-212ENST00000536196 RAB33AQ14088 237 aa22.94■■□□□ 1.26
CHFR-212ENST00000536196 KYAT1Q16773 422 aa22.94■■□□□ 1.26
CHFR-212ENST00000536196 KRI1Q8N9T8 703 aaKnown RBP22.94■■□□□ 1.26
CHFR-212ENST00000536196 CLIC6Q96NY7 704 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms