RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 LPCAT4Q643R3 524 aa15□□□□□ -0.01
PCF11-204ENST00000530660 RIPOR1Q6ZS17 1223 aa15□□□□□ -0.01
PCF11-204ENST00000530660 ANKRD35Q8N283 1001 aa15□□□□□ -0.01
PCF11-204ENST00000530660 OR6Y1Q8NGX8 325 aa15□□□□□ -0.01
PCF11-204ENST00000530660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15□□□□□ -0.01
PCF11-204ENST00000530660 IRGQQ8WZA9 623 aa15□□□□□ -0.01
PCF11-204ENST00000530660 C9orf72Q96LT7 481 aa15□□□□□ -0.01
PCF11-204ENST00000530660 CHORDC1Q9UHD1 332 aaPredicted RBP15□□□□□ -0.01
PCF11-204ENST00000530660 PCDHA4Q9UN74 947 aa15□□□□□ -0.01
PCF11-204ENST00000530660 RGL2O15211 777 aa15□□□□□ -0.01
PCF11-204ENST00000530660 IDO1P14902 403 aa15□□□□□ -0.01
PCF11-204ENST00000530660 RXRGP48443 463 aa15□□□□□ -0.01
PCF11-204ENST00000530660 SERPINB8P50452 374 aa15□□□□□ -0.01
PCF11-204ENST00000530660 TBL3Q12788 808 aaKnown RBP15□□□□□ -0.01
PCF11-204ENST00000530660 SPARCL1Q14515 664 aa15□□□□□ -0.01
PCF11-204ENST00000530660 LETM2Q2VYF4 491 aa15□□□□□ -0.01
PCF11-204ENST00000530660 PAOXQ6QHF9 649 aa15□□□□□ -0.01
PCF11-204ENST00000530660 MYOCDQ8IZQ8 938 aa15□□□□□ -0.01
PCF11-204ENST00000530660 ZFP28Q8NHY6 868 aa15□□□□□ -0.01
PCF11-204ENST00000530660 PRICKLE1Q96MT3 831 aaPredicted RBP15□□□□□ -0.01
PCF11-204ENST00000530660 CYLDQ9NQC7 956 aa15□□□□□ -0.01
PCF11-204ENST00000530660 FAIMQ9NVQ4 179 aa15□□□□□ -0.01
PCF11-204ENST00000530660 ARMCX1Q9P291 453 aa15□□□□□ -0.01
PCF11-204ENST00000530660 NENFQ9UMX5 172 aa15□□□□□ -0.01
PCF11-204ENST00000530660 MAGEB6P1A0A0J9YX57 407 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 CDH16O75309 829 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 ESRRAP11474 423 aaPredicted RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 NPEPPSP55786 919 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 GEMIN4P57678 1058 aaKnown RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 PDK4Q16654 411 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 CC2D2BQ6DHV5 1058 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 METTL25Q8N6Q8 603 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 LNX1Q8TBB1 728 aaPredicted RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 MRRFQ96E11 262 aaKnown RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 PANX3Q96QZ0 392 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 KCPQ6ZWJ8 1503 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 P4HA2O15460 535 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 BUD23O43709 281 aaKnown RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 ADCY3O60266 1144 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 TFAP2AP05549 437 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 YY1P25490 414 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 PIK3CAP42336 1068 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 AQP4P55087 323 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 ITGA9Q13797 1035 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 NADK2Q4G0N4 442 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 DPY19L2P1Q6NXN4 242 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 SHKBP1Q8TBC3 707 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 DDX12PQ92771 950 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 NINJ2Q9NZG7 142 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 SLAIN2Q9P270 581 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 COG5Q9UP83 839 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 BCORQ6W2J9 1755 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 CCNT1O60563 726 aaKnown RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 HNRNPCL1O60812 293 aaKnown RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 GSTT2P0CG29 244 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 GSTT2BP0CG30 244 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 SMIM18P0DKX4 95 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 ALAS1P13196 640 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 ATP6V1B1P15313 513 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 MUTP22033 750 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 CALML3P27482 149 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 COILP38432 576 aaPredicted RBP14.99□□□□□ -0.01
PCF11-204ENST00000530660 PSMD7P51665 324 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 ZBTB16Q05516 673 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 GRM2Q14416 872 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 ACAP1Q15027 740 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 LRRC6Q86X45 466 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 ZBED8Q8IZ13 594 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 DENND1AQ8TEH3 1009 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 RFFLQ8WZ73 363 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 GRIP2Q9C0E4 1043 aa14.99□□□□□ -0.01
PCF11-204ENST00000530660 VCLP18206 1134 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 CTNNA2P26232 953 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 HIRAP54198 1017 aaPredicted RBP14.98□□□□□ -0.01
PCF11-204ENST00000530660 NAA20P61599 178 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 GRB10Q13322 594 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 MSLNQ13421 630 aaPredicted RBP14.98□□□□□ -0.01
PCF11-204ENST00000530660 ITGA7Q13683 1181 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 USH1GQ495M9 461 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 VPS36Q86VN1 386 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 PDSS2Q86YH6 399 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 CALML4Q96GE6 196 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 ALG6Q9Y672 507 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 POTEFA5A3E0 1075 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 A8MXQ7 604 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 BTBD19C9JJ37 291 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 SPTLC1O15269 473 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 CA4P22748 312 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 MTMR2Q13614 643 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 NCOA4Q13772 614 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 PDK3Q15120 406 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 MAPK6Q16659 721 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 POTEEQ6S8J3 1075 aa14.98□□□□□ -0.01
PCF11-204ENST00000530660 DNAJC10Q8IXB1 793 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms