RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CLTAP09496 248 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 CLCNKBP51801 687 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 SLC10A6Q3KNW5 377 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 GPR149Q86SP6 731 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 DDX12PQ92771 950 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 PLEKHA4Q9H4M7 779 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 C11orf16Q9NQ32 467 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 MAN1C1Q9NR34 630 aa36.09■■■■□ 3.37
SSSCA1-205ENST00000527920 PAPLNO95428 1278 aa36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 F13A1P00488 732 aa36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 STAT6P42226 847 aa36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 SOX4Q06945 474 aaPredicted RBP36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 ATL3Q6DD88 541 aa36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 CYP26C1Q6V0L0 522 aa36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 HAPLN2Q9GZV7 340 aa36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 CDH22Q9UJ99 828 aa36.08■■■■□ 3.37
SSSCA1-205ENST00000527920 MYMKA6NI61 221 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 SPDYE4A6NLX3 237 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 TRAPPC3O43617 180 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 FGFR3P22607 806 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 RPL9P32969 192 aaKnown RBP36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 CD300LGQ6UXG3 332 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 TMC5Q6UXY8 1006 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 HVCN1Q96D96 273 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 DNAJC19Q96DA6 116 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 GOLGA2P5Q9HBQ8 144 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 TFIP11Q9UBB9 837 aaKnown RBP36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 MUTYHQ9UIF7 546 aa36.07■■■■□ 3.36
SSSCA1-205ENST00000527920 GAP43P17677 238 aa36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 NMT1P30419 496 aaKnown RBP36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 MATR3P43243 847 aaKnown RBP eCLIP36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 LILRA6Q6PI73 481 aa36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 DYMQ7RTS9 669 aa36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 LNX1Q8TBB1 728 aaPredicted RBP36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 LRFN3Q9BTN0 628 aa36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 MYH15Q9Y2K3 1946 aa36.06■■■■□ 3.36
SSSCA1-205ENST00000527920 A0A087X0B3 334 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 OGTO15294 1046 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 FAM189A1O60320 539 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 KANK3Q6NY19 840 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 PRSS55Q6UWB4 352 aaPredicted RBP36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 ZNF720Q7Z2F6 126 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 SFR1Q86XK3 245 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 USTQ9Y2C2 406 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 CITO14578 2027 aa36.05■■■■□ 3.36
SSSCA1-205ENST00000527920 TRIP11Q15643 1979 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 A0A0B4J269 797 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 TTC26A0AVF1 554 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 TGM5O43548 720 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 CUTAO60888 179 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 PSMD5Q16401 504 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 SEZ6Q53EL9 994 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 CEP57Q86XR8 500 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 C3orf58Q8NDZ4 430 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 KCNG4Q8TDN1 519 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 TSPAN18Q96SJ8 248 aa36.04■■■■□ 3.36
SSSCA1-205ENST00000527920 PODXLO00592 558 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 PPP1R37O75864 691 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 WEE2P0C1S8 567 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 CXCL8P10145 99 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 RPL17P18621 184 aaKnown RBP36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 SLC39A4Q6P5W5 647 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 CLSTN3Q9BQT9 956 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 CUEDC2Q9H467 287 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 OLFML3Q9NRN5 406 aa36.03■■■■□ 3.36
SSSCA1-205ENST00000527920 FRMD3A2A2Y4 597 aa36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 ADRB2P07550 413 aa36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 IGFBP6P24592 240 aaPredicted RBP36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 FOXD4L5Q5VV16 416 aaPredicted RBP36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 PALB2Q86YC2 1186 aa36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 FOXD4L4Q8WXT5 416 aaPredicted RBP36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 C18orf25Q96B23 403 aaPredicted RBP36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 STRA6Q9BX79 667 aa36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 ZDHHC7Q9NXF8 308 aa36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 STYXL1Q9Y6J8 313 aa36.02■■■■□ 3.36
SSSCA1-205ENST00000527920 PRR33A8MZF0 331 aa36.01■■■■□ 3.36
SSSCA1-205ENST00000527920 ZC2HC1CQ53FD0 456 aaPredicted RBP36.01■■■■□ 3.36
SSSCA1-205ENST00000527920 MSTO1Q9BUK6 570 aa36.01■■■■□ 3.36
SSSCA1-205ENST00000527920 PANK2Q9BZ23 570 aa36.01■■■■□ 3.36
SSSCA1-205ENST00000527920 PPP2R3AQ06190 1150 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 SLFN12LQ6IEE8 588 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 ANKS3Q6ZW76 656 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 PDILTQ8N807 584 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 KREMEN2Q8NCW0 462 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 EDAQ92838 391 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 TNMDQ9H2S6 317 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 TSHZ2Q9NRE2 1034 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 MTRRQ9UBK8 725 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 BACE2Q9Y5Z0 518 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 PLXNA3P51805 1871 aa36■■■■□ 3.35
SSSCA1-205ENST00000527920 FAM86C2PA6NEL3 165 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 CYP3A5P20815 502 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 PKP1Q13835 747 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 ZBTB6Q15916 424 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 ENOX2Q16206 610 aaKnown RBP35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 E2F4Q16254 413 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 AXDND1Q5T1B0 1012 aaPredicted RBP35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 CCDC149Q6ZUS6 474 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 CD302Q8IX05 232 aa35.99■■■■□ 3.35
SSSCA1-205ENST00000527920 LRRC27Q9C0I9 530 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms