RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 RAD51AP2Q09MP3 1159 aa27.73■■■□□ 2.03
VEGFA-220ENST00000519767 RAB33AQ14088 237 aa27.73■■■□□ 2.03
VEGFA-220ENST00000519767 UVSSAQ2YD98 709 aa27.73■■■□□ 2.03
VEGFA-220ENST00000519767 ZPBP2Q6X784 338 aa27.73■■■□□ 2.03
VEGFA-220ENST00000519767 ALYREFQ86V81 257 aaKnown RBP27.73■■■□□ 2.03
VEGFA-220ENST00000519767 CEP120Q8N960 986 aa27.73■■■□□ 2.03
VEGFA-220ENST00000519767 PRSS33Q8NF86 280 aa27.73■■■□□ 2.03
VEGFA-220ENST00000519767 N4BP1O75113 896 aaKnown RBP27.72■■■□□ 2.03
VEGFA-220ENST00000519767 PDGFBP01127 241 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-220ENST00000519767 MAPTP10636 758 aaKnown RBP27.72■■■□□ 2.03
VEGFA-220ENST00000519767 RPL9P32969 192 aaKnown RBP27.72■■■□□ 2.03
VEGFA-220ENST00000519767 SMOC2Q9H3U7 446 aa27.72■■■□□ 2.03
VEGFA-220ENST00000519767 BACE2Q9Y5Z0 518 aa27.72■■■□□ 2.03
VEGFA-220ENST00000519767 ZFP37Q9Y6Q3 630 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-220ENST00000519767 CACNA1HO95180 2353 aa27.72■■■□□ 2.03
VEGFA-220ENST00000519767 ABLIM1O14639 778 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 PDCP20941 246 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 HOXA9P31269 272 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 LONP1P36776 959 aaKnown RBP27.71■■■□□ 2.03
VEGFA-220ENST00000519767 CD300LGQ6UXG3 332 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 ANKS3Q6ZW76 656 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 SNX27Q96L92 541 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 MFSD1Q9H3U5 465 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 MTRRQ9UBK8 725 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 ODF2LQ9ULJ1 636 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 DUSP12Q9UNI6 340 aa27.71■■■□□ 2.03
VEGFA-220ENST00000519767 CLDN3O15551 220 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 OR1D2P34982 312 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 CLCN5P51795 746 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 ARSHQ5FYA8 562 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 PPM1LQ5SGD2 360 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 KCNN1Q92952 543 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 MYADMQ96S97 322 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 CNTN3Q9P232 1028 aa27.7■■■□□ 2.02
VEGFA-220ENST00000519767 XYLBO75191 536 aa27.69■■■□□ 2.02
VEGFA-220ENST00000519767 LAMP2P13473 410 aa27.69■■■□□ 2.02
VEGFA-220ENST00000519767 MRE11P49959 708 aa27.69■■■□□ 2.02
VEGFA-220ENST00000519767 CUL4AQ13619 759 aa27.69■■■□□ 2.02
VEGFA-220ENST00000519767 NOLC1Q14978 699 aaKnown RBP eCLIP27.69■■■□□ 2.02
VEGFA-220ENST00000519767 ASTLQ6HA08 431 aaPredicted RBP27.69■■■□□ 2.02
VEGFA-220ENST00000519767 ZBTB45Q96K62 511 aaPredicted RBP27.69■■■□□ 2.02
VEGFA-220ENST00000519767 ZMAT2Q96NC0 199 aaKnown RBP27.69■■■□□ 2.02
VEGFA-220ENST00000519767 GOLGA2P5Q9HBQ8 144 aa27.69■■■□□ 2.02
VEGFA-220ENST00000519767 PODXLO00592 558 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 ADAM12O43184 909 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 C8AP07357 584 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 POU2F2P09086 479 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 SOX4Q06945 474 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-220ENST00000519767 MCL1Q07820 350 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 TCF15Q12870 199 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 AXDND1Q5T1B0 1012 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-220ENST00000519767 PLEKHA5Q9HAU0 1116 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-220ENST00000519767 PLXNA3P51805 1871 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 DENND4AQ7Z401 1863 aa27.68■■■□□ 2.02
VEGFA-220ENST00000519767 MTCL1Q9Y4B5 1905 aaKnown RBP27.67■■■□□ 2.02
VEGFA-220ENST00000519767 FSHRP23945 695 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 IGFBP6P24592 240 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-220ENST00000519767 TKTP29401 623 aaKnown RBP27.67■■■□□ 2.02
VEGFA-220ENST00000519767 NCKAP1LP55160 1127 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 KYAT1Q16773 422 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 HAUS6Q7Z4H7 955 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 SLC44A3Q8N4M1 653 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 C3orf58Q8NDZ4 430 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 ANKFY1Q9P2R3 1169 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 WNT16Q9UBV4 365 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 FBXL21Q9UKT6 434 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 CDY1Q9Y6F8 540 aa27.67■■■□□ 2.02
VEGFA-220ENST00000519767 NPHP3-ACAD11A0A0J9YXS1 232 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 SYN3O14994 580 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 CLTAP09496 248 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 HARSP12081 509 aaKnown RBP27.66■■■□□ 2.02
VEGFA-220ENST00000519767 ABCD1P33897 745 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 SF3A1Q15459 793 aaKnown RBP27.66■■■□□ 2.02
VEGFA-220ENST00000519767 SLC10A6Q3KNW5 377 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 GRASPQ7Z6J2 395 aaPredicted RBP27.66■■■□□ 2.02
VEGFA-220ENST00000519767 GPBP1Q86WP2 473 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 NUB1Q9Y5A7 615 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 C2orf16Q68DN1 1984 aa27.66■■■□□ 2.02
VEGFA-220ENST00000519767 GALR2O43603 387 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-220ENST00000519767 MATR3P43243 847 aaKnown RBP eCLIP27.65■■■□□ 2.02
VEGFA-220ENST00000519767 BRCC3P46736 316 aa27.65■■■□□ 2.02
VEGFA-220ENST00000519767 GET4Q7L5D6 327 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-220ENST00000519767 MYCT1Q8N699 235 aa27.65■■■□□ 2.02
VEGFA-220ENST00000519767 RASSF8Q8NHQ8 419 aa27.65■■■□□ 2.02
VEGFA-220ENST00000519767 ZNF461Q8TAF7 563 aa27.65■■■□□ 2.02
VEGFA-220ENST00000519767 SLC7A14Q8TBB6 771 aa27.65■■■□□ 2.02
VEGFA-220ENST00000519767 BICD1Q96G01 975 aa27.65■■■□□ 2.02
VEGFA-220ENST00000519767 REEP2Q9BRK0 252 aa27.65■■■□□ 2.02
VEGFA-220ENST00000519767 ANHXE9PGG2 379 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 H7C4K7 107 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 I3L4J1 428 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 ZNF131P52739 623 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 SLC8B1Q6J4K2 584 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 RSPO2Q6UXX9 243 aaPredicted RBP27.64■■■□□ 2.02
VEGFA-220ENST00000519767 RSAD2Q8WXG1 361 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 C18orf25Q96B23 403 aaPredicted RBP27.64■■■□□ 2.02
VEGFA-220ENST00000519767 TSPAN18Q96SJ8 248 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 PARVGQ9HBI0 331 aa27.64■■■□□ 2.02
VEGFA-220ENST00000519767 BLOC1S4Q9NUP1 217 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms