RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 IARSP41252 1262 aaKnown RBP4.35□□□□□ -1.71
HERC4-215ENST00000515753 SEC24CP53992 1094 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 APBA1Q02410 837 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 TP53BP2Q13625 1128 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 PDCD4Q53EL6 469 aaKnown RBP4.35□□□□□ -1.71
HERC4-215ENST00000515753 FAM47AQ5JRC9 791 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 PRAMEF14Q5SWL7 426 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 SP5Q6BEB4 398 aaPredicted RBP4.35□□□□□ -1.71
HERC4-215ENST00000515753 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.35□□□□□ -1.71
HERC4-215ENST00000515753 GPATCH3Q96I76 525 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 ADI1Q9BV57 179 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 FAM30AQ9NZY2 134 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 ZBTB21Q9ULJ3 1066 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 NOP58Q9Y2X3 529 aaKnown RBP4.35□□□□□ -1.71
HERC4-215ENST00000515753 ATRNL1Q5VV63 1379 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 AKR1B10O60218 316 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 OSMP13725 252 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 ALOX15P16050 662 aaPredicted RBP4.34□□□□□ -1.71
HERC4-215ENST00000515753 CXCR5P32302 372 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 AVPR1BP47901 424 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 GUCY1B3Q02153 619 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 PLXDC1Q8IUK5 500 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 RNF169Q8NCN4 708 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 OR10H5Q8NGA6 315 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 ASB10Q8WXI3 467 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 CYFIP2Q96F07 1278 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 FAXDC2Q96IV6 333 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 ADAM2Q99965 735 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 ASPSCR1Q9BZE9 553 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 DMRT3Q9NQL9 472 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 LANCL2Q9NS86 450 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 POGKQ9P215 609 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 INSL6Q9Y581 213 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 WASHC2CQ9Y4E1 1318 aa4.34□□□□□ -1.71
HERC4-215ENST00000515753 GAGE12BA1L429 117 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 PIPSLA2A3N6 862 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 GAGE12HA6NDE8 117 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 DIRC3C9JPN6 131 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 TEX33O43247 280 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 ADCY6O43306 1168 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 KATNA1O75449 491 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 HKR1P10072 659 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 IL2RBP14784 551 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 DDX6P26196 483 aaKnown RBP eCLIP4.33□□□□□ -1.72
HERC4-215ENST00000515753 MGAT1P26572 445 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 BMPR1AP36894 532 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 CCT2P78371 535 aaKnown RBP4.33□□□□□ -1.72
HERC4-215ENST00000515753 SEPT2Q15019 361 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 BMT2Q1RMZ1 405 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 ABCB5Q2M3G0 1257 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 PRR16Q569H4 304 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 MFSD14BQ5SR56 506 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 SIMC1Q8NDZ2 872 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.33□□□□□ -1.72
HERC4-215ENST00000515753 JADE3Q92613 823 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 MTMR8Q96EF0 704 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 CEP95Q96GE4 821 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 MKS1Q9NXB0 559 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 MOCS1Q9NZB8 636 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 TESQ9UGI8 421 aaKnown RBP4.33□□□□□ -1.72
HERC4-215ENST00000515753 TUBD1Q9UJT1 453 aa4.33□□□□□ -1.72
HERC4-215ENST00000515753 USP15Q9Y4E8 981 aaPredicted RBP4.33□□□□□ -1.72
HERC4-215ENST00000515753 KLHL33A6NCF5 533 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 TBKBP1A7MCY6 615 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 SGTAO43765 313 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 PCDHGA12O60330 932 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 NDUFS2O75306 463 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 SPDEFO95238 335 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 MT-CO1P00395 513 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 SNRPA1P09661 255 aaKnown RBP4.32□□□□□ -1.72
HERC4-215ENST00000515753 IBSPP21815 317 aaPredicted RBP4.32□□□□□ -1.72
HERC4-215ENST00000515753 SLC6A9P48067 706 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 SLC16A1P53985 500 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 KRTAP10-11P60412 298 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 ITKQ08881 620 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 RESTQ13127 1097 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 TMEM240Q5SV17 173 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 OTUD7BQ6GQQ9 843 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 EFCAB12Q6NXP0 572 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 DRC7Q8IY82 874 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 SLC44A3Q8N4M1 653 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 BOLLQ8N9W6 283 aaKnown RBP4.32□□□□□ -1.72
HERC4-215ENST00000515753 ZFP28Q8NHY6 868 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 MDM1Q8TC05 714 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 FUBP3Q96I24 572 aaKnown RBP eCLIP4.32□□□□□ -1.72
HERC4-215ENST00000515753 COQ10AQ96MF6 247 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 MANSC1Q9H8J5 431 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 HOMER2Q9NSB8 354 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 SIK3Q9Y2K2 1263 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 PCDHGA9Q9Y5G4 932 aaKnown RBP4.32□□□□□ -1.72
HERC4-215ENST00000515753 PCDHGA8Q9Y5G5 932 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 PCDHGA7Q9Y5G6 932 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 PCDHGA6Q9Y5G7 932 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 PCDHGA3Q9Y5H0 932 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 PCDHGA2Q9Y5H1 932 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 MRFAP1Q9Y605 127 aa4.32□□□□□ -1.72
HERC4-215ENST00000515753 SALL3Q9BXA9 1300 aa4.31□□□□□ -1.72
HERC4-215ENST00000515753 CXorf49A8MYA2 514 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms