RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GPR149Q86SP6 731 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 PALB2Q86YC2 1186 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 TDRD5Q8NAT2 981 aaKnown RBP20.37■□□□□ 0.85
UBE3D-207ENST00000509102 PIK3R5Q8WYR1 880 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 ZBTB45Q96K62 511 aaPredicted RBP20.37■□□□□ 0.85
UBE3D-207ENST00000509102 CXCL16Q9H2A7 254 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 CNTN3Q9P232 1028 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 HCN4Q9Y3Q4 1203 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 ABLIM1O14639 778 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 CLTAP09496 248 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 WEE2P0C1S8 567 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 RPL9P32969 192 aaKnown RBP20.36■□□□□ 0.85
UBE3D-207ENST00000509102 UPP1Q16831 310 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 RTP2Q5QGT7 225 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 GLYCTKQ8IVS8 523 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 PLCD3Q8N3E9 789 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 CMASQ8NFW8 434 aaPredicted RBP20.36■□□□□ 0.85
UBE3D-207ENST00000509102 LRRC15Q8TF66 581 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 ACSF2Q96CM8 615 aaPredicted RBP20.36■□□□□ 0.85
UBE3D-207ENST00000509102 PLEKHA5Q9HAU0 1116 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 SEL1LQ9UBV2 794 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 USTQ9Y2C2 406 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 NUB1Q9Y5A7 615 aa20.36■□□□□ 0.85
UBE3D-207ENST00000509102 SPTLC2O15270 562 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 TGM5O43548 720 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 XPOTO43592 962 aaKnown RBP20.35■□□□□ 0.85
UBE3D-207ENST00000509102 GAP43P17677 238 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 PPP2R3AQ06190 1150 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 LIN9Q5TKA1 542 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 PRSS55Q6UWB4 352 aaPredicted RBP20.35■□□□□ 0.85
UBE3D-207ENST00000509102 DYMQ7RTS9 669 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 STAMQ92783 540 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 EDAQ92838 391 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 LRRC27Q9C0I9 530 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 PIDD1Q9HB75 910 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 GOLGA2P5Q9HBQ8 144 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 ZDHHC7Q9NXF8 308 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 CDH22Q9UJ99 828 aa20.35■□□□□ 0.85
UBE3D-207ENST00000509102 CCDC195A0A1B0GUA6 201 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 PODXLO00592 558 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 PPP6R2O75170 966 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 YEATS4O95619 227 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 PIGRP01833 764 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 ZSCAN22P10073 491 aaPredicted RBP20.34■□□□□ 0.85
UBE3D-207ENST00000509102 RPL17P18621 184 aaKnown RBP20.34■□□□□ 0.85
UBE3D-207ENST00000509102 GTF2BQ00403 316 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 KANK3Q6NY19 840 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 ANKS3Q6ZW76 656 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 OTOP3Q7RTS5 596 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 MAP4K3Q8IVH8 894 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 LINC00301Q8NCQ3 95 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 KREMEN2Q8NCW0 462 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 LNX1Q8TBB1 728 aaPredicted RBP20.34■□□□□ 0.85
UBE3D-207ENST00000509102 DDX12PQ92771 950 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 HVCN1Q96D96 273 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 MSTO1Q9BUK6 570 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 C11orf16Q9NQ32 467 aa20.34■□□□□ 0.85
UBE3D-207ENST00000509102 OGTO15294 1046 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 SPATA31D3P0C874 917 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 CXCL8P10145 99 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 FGFR3P22607 806 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 NMT1P30419 496 aaKnown RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 PTPN21Q16825 1174 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 SLC10A6Q3KNW5 377 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 SEZ6Q53EL9 994 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 SLFN12LQ6IEE8 588 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 SPATA31D4Q6ZUB0 917 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 SMG7Q92540 1137 aaKnown RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 ZMAT2Q96NC0 199 aaKnown RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 TSPAN18Q96SJ8 248 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 RHOBTB2Q9BYZ6 727 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 ST6GALNAC4Q9H4F1 302 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 MRPL44Q9H9J2 332 aaKnown RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 RPF1Q9H9Y2 349 aaKnown RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 TFIP11Q9UBB9 837 aaKnown RBP20.33■□□□□ 0.85
UBE3D-207ENST00000509102 EXOC7Q9UPT5 735 aa20.33■□□□□ 0.85
UBE3D-207ENST00000509102 CITO14578 2027 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 C2CD4DB7Z1M9 353 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 MYBP10242 640 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 IDEP14735 1019 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 ZXDAP98168 799 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 SOX4Q06945 474 aaPredicted RBP20.32■□□□□ 0.84
UBE3D-207ENST00000509102 ATL3Q6DD88 541 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 SFR1Q86XK3 245 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 ZDHHC14Q8IZN3 488 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 KCNG4Q8TDN1 519 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 KIF12Q96FN5 646 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 PANK2Q9BZ23 570 aa20.32■□□□□ 0.84
UBE3D-207ENST00000509102 SYN3O14994 580 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 CUTAO60888 179 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 F13A1P00488 732 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 MCM4P33991 863 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 MTMR3Q13615 1198 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 LILRA6Q6PI73 481 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 CD302Q8IX05 232 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 PDILTQ8N807 584 aa20.31■□□□□ 0.84
UBE3D-207ENST00000509102 C18orf25Q96B23 403 aaPredicted RBP20.31■□□□□ 0.84
UBE3D-207ENST00000509102 CLSTN3Q9BQT9 956 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms