RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CYP26C1Q6V0L0 522 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 SPATA31D4Q6ZUB0 917 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 CCDC149Q6ZUS6 474 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 ZDHHC14Q8IZN3 488 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 CMASQ8NFW8 434 aaPredicted RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 LRRC15Q8TF66 581 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 HDAC7Q8WUI4 952 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 FAM122AQ96E09 287 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 ZBTB45Q96K62 511 aaPredicted RBP9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 SNX27Q96L92 541 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 MFSD14AQ96MC6 490 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 ACAP3Q96P50 834 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 REEP2Q9BRK0 252 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 CCSER1Q9C0I3 900 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 PLEKHA4Q9H4M7 779 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 GOLGA2P5Q9HBQ8 144 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 BLOC1S4Q9NUP1 217 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 ANKFY1Q9P2R3 1169 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 SORCS3Q9UPU3 1222 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 CLIC4Q9Y696 253 aa9.28□□□□□ -0.92
HMGXB4-207ENST00000498212 K7ENM7 598 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 CLDN3O15551 220 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 TRAPPC3O43617 180 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 RFPL2O75678 378 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 FAM13AO94988 1023 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 KRT18P05783 430 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 TIE1P35590 1138 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 PLA2G5P39877 138 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 MATR3P43243 847 aaKnown RBP eCLIP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 SOX4Q06945 474 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 MTMR3Q13615 1198 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 PTPAQ15257 358 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 UPP1Q16831 310 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 LILRA6Q6PI73 481 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 DCLRE1AQ6PJP8 1040 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 ZPBP2Q6X784 338 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 OTOP3Q7RTS5 596 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 HAUS6Q7Z4H7 955 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 BMP8AQ7Z5Y6 402 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 MYCT1Q8N699 235 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 KREMEN2Q8NCW0 462 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 LNX1Q8TBB1 728 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 SMG7Q92540 1137 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 LARP4BQ92615 738 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 RAD54LQ92698 747 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 PBXIP1Q96AQ6 731 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 ASIC4Q96FT7 647 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 BICD1Q96G01 975 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 ZMAT2Q96NC0 199 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 CLSTN3Q9BQT9 956 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 RHOBTB2Q9BYZ6 727 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 ZDHHC7Q9NXF8 308 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 CNTN3Q9P232 1028 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 CCDC39Q9UFE4 941 aa9.27□□□□□ -0.93
HMGXB4-207ENST00000498212 PODXLO00592 558 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 STX6O43752 255 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 TRAK2O60296 914 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 TBCAO75347 108 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 PAPLNO95428 1278 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 KCNE1P15382 129 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 SCP2P22307 547 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 FGFR3P22607 806 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 DDIT3P35638 169 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 TXLNAP40222 546 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 BRCC3P46736 316 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 LIG4P49917 911 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 ZNF131P52739 623 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 CEBPZQ03701 1054 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 MCL1Q07820 350 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 SLC10A6Q3KNW5 377 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 SEZ6Q53EL9 994 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 SPECC1Q5M775 1068 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 CD300LGQ6UXG3 332 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 SUGP1Q8IWZ8 645 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 UBALD2Q8IYN6 164 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 C3orf58Q8NDZ4 430 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 STAMQ92783 540 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 KCNN1Q92952 543 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 ZNF707Q96C28 371 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 EPSTI1Q96J88 318 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 PRKD2Q9BZL6 878 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 ZHX3Q9H4I2 956 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 ZSCAN16Q9H4T2 348 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 PIDD1Q9HB75 910 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 PARVGQ9HBI0 331 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 WDR6Q9NNW5 1121 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 STK17AQ9UEE5 414 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 LIMD1Q9UGP4 676 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 FBXO2Q9UK22 296 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 FBXW11Q9UKB1 542 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 TBX20Q9UMR3 447 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 MTMR6Q9Y217 621 aa9.26□□□□□ -0.93
HMGXB4-207ENST00000498212 SRPRBQ9Y5M8 271 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms