RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 SENP2Q9HC62 589 aa15.91■□□□□ 0.14
RNF220-218ENST00000497469 STK24Q9Y6E0 443 aa15.91■□□□□ 0.14
RNF220-218ENST00000497469 ATG2BQ96BY7 2078 aa15.91■□□□□ 0.14
RNF220-218ENST00000497469 ATMQ13315 3056 aa15.91■□□□□ 0.14
RNF220-218ENST00000497469 ADAMTS9Q9P2N4 1935 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 PTPRBP23467 1997 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 SLC28A2O43868 658 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 OPHN1O60890 802 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 ATG13O75143 517 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 MOSPD3O75425 235 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 LRG1P02750 347 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 KRT10P13645 584 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 RAB33AQ14088 237 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 MCMDC2Q4G0Z9 681 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 CEP55Q53EZ4 464 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 FSTL4Q6MZW2 842 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 RHPN2Q8IUC4 686 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 SLITRK6Q9H5Y7 841 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 PCDHB9Q9Y5E1 797 aa15.9■□□□□ 0.14
RNF220-218ENST00000497469 MUC22E2RYF6 1773 aaPredicted RBP15.9■□□□□ 0.14
RNF220-218ENST00000497469 DHX15O43143 795 aaKnown RBP15.89■□□□□ 0.13
RNF220-218ENST00000497469 APBB3O95704 486 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 OATP04181 439 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 MAPK6Q16659 721 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 TOGARAM2Q6ZUX3 1019 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 TMEM209Q96SK2 561 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 SH2D3AQ9BRG2 576 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 EIF2AQ9BY44 585 aaKnown RBP15.89■□□□□ 0.13
RNF220-218ENST00000497469 POLMQ9NP87 494 aaPredicted RBP15.89■□□□□ 0.13
RNF220-218ENST00000497469 ZBTB40Q9NUA8 1239 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 IPPQ9Y573 584 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 CDY1Q9Y6F8 540 aa15.89■□□□□ 0.13
RNF220-218ENST00000497469 TDRD15B5MCY1 1934 aaKnown RBP15.89■□□□□ 0.13
RNF220-218ENST00000497469 KIF26AQ9ULI4 1882 aaPredicted RBP15.88■□□□□ 0.13
RNF220-218ENST00000497469 CAPN8A6NHC0 703 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 ZNF197O14709 1029 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 KIF4AO95239 1232 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 EGFP01133 1207 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 MYL4P12829 197 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 PRKCEQ02156 737 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 HSP90AA2PQ14568 343 aaPredicted RBP15.88■□□□□ 0.13
RNF220-218ENST00000497469 TEAD2Q15562 447 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 TAF1BQ53T94 588 aaPredicted RBP15.88■□□□□ 0.13
RNF220-218ENST00000497469 MINDY1Q8N5J2 469 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 FAM167AQ96KS9 214 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 LRRC3BQ96PB8 259 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 TRIM4Q9C037 500 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 INO80BQ9C086 356 aaPredicted RBP15.88■□□□□ 0.13
RNF220-218ENST00000497469 TRPV4Q9HBA0 871 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 TTC41PQ6P2S7 1318 aa15.88■□□□□ 0.13
RNF220-218ENST00000497469 SPTAN1Q13813 2472 aaKnown RBP15.88■□□□□ 0.13
RNF220-218ENST00000497469 MYH9P35579 1960 aaKnown RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 FAM149AA5PLN7 773 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 TMEM150BA6NC51 233 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 HOXA11P31270 313 aaPredicted RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 EIF2S3P41091 472 aaKnown RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 PTGER3P43115 390 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 FCHO2Q0JRZ9 810 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 NMIQ13287 307 aaPredicted RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 USP39Q53GS9 565 aaKnown RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 PDXDC1Q6P996 788 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 CYB5R4Q7L1T6 521 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 FMNL3Q8IVF7 1028 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 UBN1Q9NPG3 1134 aa15.87■□□□□ 0.13
RNF220-218ENST00000497469 CIZ1Q9ULV3 898 aaPredicted RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 APOBEC2Q9Y235 224 aaKnown RBP15.87■□□□□ 0.13
RNF220-218ENST00000497469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 hCG_1642624A0A1W2PR95 340 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 CASTOR2A6NHX0 329 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 B8ZZF3 427 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 MEIS1O00470 390 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 PSAPP07602 524 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 HNRNPUQ00839 825 aaKnown RBP eCLIP15.86■□□□□ 0.13
RNF220-218ENST00000497469 HNRNPDQ14103 355 aaKnown RBP15.86■□□□□ 0.13
RNF220-218ENST00000497469 DMC1Q14565 340 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 UGCGQ16739 394 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 GPR155Q7Z3F1 870 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 ZNF513Q8N8E2 541 aaPredicted RBP15.86■□□□□ 0.13
RNF220-218ENST00000497469 DAGLBQ8NCG7 672 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 RPLP0P6Q8NHW5 317 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 MINDY3Q9H8M7 445 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 SUCLA2Q9P2R7 463 aaPredicted RBP15.86■□□□□ 0.13
RNF220-218ENST00000497469 SEC63Q9UGP8 760 aaKnown RBP15.86■□□□□ 0.13
RNF220-218ENST00000497469 EBF1Q9UH73 591 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 TCEAL9Q9UHQ7 104 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 NBPF19A0A087WUL8 3843 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 MGAQ8IWI9 3026 aa15.86■□□□□ 0.13
RNF220-218ENST00000497469 TEX51A0A1B0GUA7 166 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 PRRG1O14668 218 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
RNF220-218ENST00000497469 GRSF1Q12849 480 aaKnown RBP eCLIP15.85■□□□□ 0.13
RNF220-218ENST00000497469 MTERF2Q49AM1 385 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 TMEM196Q5HYL7 178 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 CYP4A22Q5TCH4 519 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 SLC23A3Q6PIS1 610 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 TMPRSS7Q7RTY8 843 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 ZNF410Q86VK4 478 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 SYT12Q8IV01 421 aa15.85■□□□□ 0.13
RNF220-218ENST00000497469 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms