RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 DENND2CQ68D51 928 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 CYB5D1Q6P9G0 228 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 HOOK3Q86VS8 718 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.74□□□□□ -0.851e-16■□□□□ 8.7
TM9SF4-207ENST00000495749 NEK9Q8TD19 979 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 ATP6V0A1Q93050 837 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 RNF25Q96BH1 459 aaPredicted RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 NAP1L3Q99457 506 aaPredicted RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 TXLNGYQ9BZA5 131 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 PABPC3Q9H361 631 aaKnown RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 ALG6Q9Y672 507 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 COL2A1P02458 1487 aaPredicted RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 GGPS1O95749 300 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 MYCNP04198 464 aaPredicted RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 MARCKSL1P49006 195 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 IFI35P80217 286 aaPredicted RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 CETN1Q12798 172 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 ERMARDQ5T6L9 678 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 C9orf131Q5VYM1 1079 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 INTS8Q75QN2 995 aaKnown RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 ARMC9Q7Z3E5 817 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 GPC2Q8N158 579 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 KRT35Q92764 455 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 HVCN1Q96D96 273 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 KREMEN1Q96MU8 473 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 SEMA4AQ9H3S1 761 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 CNOT10Q9H9A5 744 aaKnown RBP9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 ZNF112Q9UJU3 913 aa9.74□□□□□ -0.85
TM9SF4-207ENST00000495749 C19orf81C9J6K1 198 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 KIAA0391O15091 583 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 GJC1P36383 396 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 NLRP11P59045 1033 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 HSDL1Q3SXM5 330 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 GNPTABQ3T906 1256 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 SV2AQ7L0J3 742 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 FBXO16Q8IX29 292 aaPredicted RBP9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 LMO3Q8TAP4 145 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 ASAP3Q8TDY4 903 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 PCDHB18PQ96TA0 734 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 CCDC113Q9H0I3 377 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 AZI2Q9H6S1 392 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 ZNF302Q9NR11 478 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 PDGFCQ9NRA1 345 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 DBR1Q9UK59 544 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 GINS2Q9Y248 185 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 ATP8B3O60423 1300 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 ANKRD62A6NC57 917 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 RGS16O15492 202 aaPredicted RBP9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 SFNP31947 248 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 GTF2BQ00403 316 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 SNCBQ16143 134 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 ZDHHC24Q6UX98 284 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 NOP9Q86U38 636 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 CCT6BQ92526 530 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 IFT74Q96LB3 600 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 SYT11Q9BT88 431 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 STRA6Q9BX79 667 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 FAM129AQ9BZQ8 928 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 RNF19AQ9NV58 838 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 FBXO40Q9UH90 709 aa9.73□□□□□ -0.85
TM9SF4-207ENST00000495749 MYH11P35749 1972 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 SOWAHBA6NEL2 793 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 K7ERI5 159 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 ARIH2O95376 493 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 CCDC172P0C7W6 258 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 UBA1P22314 1058 aaKnown RBP9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 IFNAR2P48551 515 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 EMC2Q15006 297 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 PPP2R5EQ16537 467 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 CCDC197Q8NCU1 140 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 DEPTORQ8TB45 409 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 PARD3BQ8TEW8 1205 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 SGSM3Q96HU1 749 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 TRIM7Q9C029 511 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 ASCC2Q9H1I8 757 aaPredicted RBP9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 CXorf56Q9H5V9 222 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 KCND2Q9NZV8 630 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 RASAL2Q9UJF2 1139 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 DIS3Q9Y2L1 958 aaKnown RBP9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 PTPN22Q9Y2R2 807 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 FAM187AA6NFU0 413 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 GJB6O95452 261 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 EDN1P05305 212 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 NUDT17P0C025 328 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 YBX3P16989 372 aaKnown RBP eCLIP9.72□□□□□ -0.853e-7■□□□□ 10.9
TM9SF4-207ENST00000495749 FGFR4P22455 802 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 RPL21P46778 160 aaKnown RBP9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 DHX34Q14147 1143 aaKnown RBP9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 FAM182AQ5T1J6 154 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 ABHD15Q6UXT9 468 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 ZDHHC14Q8IZN3 488 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 PRELID2Q8N945 189 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 EPS8L3Q8TE67 593 aaKnown RBP9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 CPA5Q8WXQ8 436 aa9.72□□□□□ -0.85
TM9SF4-207ENST00000495749 GPRASP2Q96D09 838 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms