RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 OCA2Q04671 838 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 TMEM259Q4ZIN3 620 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 STX18Q9P2W9 335 aaKnown RBP17.19■□□□□ 0.34
BRAT1-206ENST00000493232 FBXL5Q9UKA1 691 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 SNX9Q9Y5X1 595 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 SRGNP10124 158 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 NCOA4Q13772 614 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 GSPT2Q8IYD1 628 aaKnown RBP17.19■□□□□ 0.34
BRAT1-206ENST00000493232 FAM151AQ8WW52 585 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
BRAT1-206ENST00000493232 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 POLE2P56282 527 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 PIGHQ14442 188 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 EMC2Q15006 297 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 LMBRD2Q68DH5 695 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 DDIASQ8IXT1 998 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 SPATA4Q8NEY3 305 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 PPCSQ9HAB8 311 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 HDAC6Q9UBN7 1215 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 ZNF70Q9UC06 446 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 ATP1A1P05023 1023 aaKnown RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 TEKT4Q8WW24 435 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 TSPAN17Q96FV3 270 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 REEP2Q9BRK0 252 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 YY1AP1Q9H869 796 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 KBTBD13C9JR72 458 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 ATP9BO43861 1147 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 RGS9BPQ6ZS82 235 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 OTUB1Q96FW1 271 aaPredicted RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 NAF1Q96HR8 494 aaKnown RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 WARS2Q9UGM6 360 aaKnown RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 AFF4Q9UHB7 1163 aaKnown RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 ZC3H4Q9UPT8 1303 aaKnown RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 PDGFRAP16234 1089 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 CHRNA5P30532 468 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 KCNJ6P48051 423 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 SERPINB4P48594 390 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 SNRNP35Q16560 246 aaKnown RBP17.18■□□□□ 0.34
BRAT1-206ENST00000493232 ANO5Q75V66 913 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 IGDCC4Q8TDY8 1250 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 RMDN2Q96LZ7 410 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 RIT2Q99578 217 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 SNX12Q9UMY4 172 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 ITM2BQ9Y287 266 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
BRAT1-206ENST00000493232 KCNN4O15554 427 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 HSPA9P38646 679 aaKnown RBP17.17■□□□□ 0.34
BRAT1-206ENST00000493232 DPYDQ12882 1025 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 ANKS3Q6ZW76 656 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 NEUROG2Q9H2A3 272 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 SMG5Q9UPR3 1016 aaKnown RBP17.17■□□□□ 0.34
BRAT1-206ENST00000493232 NPHP3-ACAD11A0A0J9YXS1 232 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 MAGEA9P43362 315 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 ABCE1P61221 599 aaKnown RBP17.17■□□□□ 0.34
BRAT1-206ENST00000493232 FOXD4Q12950 439 aaPredicted RBP17.17■□□□□ 0.34
BRAT1-206ENST00000493232 RNF135Q8IUD6 432 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 SPON1Q9HCB6 807 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 PRR12Q9ULL5 1215 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 LRRC7Q96NW7 1537 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 CFAP73A6NFT4 308 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 EIF3DO15371 548 aaKnown RBP eCLIP17.17■□□□□ 0.34
BRAT1-206ENST00000493232 TADA2AO75478 443 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 ACADSBP45954 432 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 VPS72Q15906 364 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 CDC42EP5Q6NZY7 148 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 RBBP8NLQ8NC74 664 aaPredicted RBP17.17■□□□□ 0.34
BRAT1-206ENST00000493232 COG4Q9H9E3 785 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 FAM95CA0A1B0GW59 222 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 H0Y3Z8 333 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 PHF2O75151 1096 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 FBXW4P57775 412 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 GTF2H3Q13889 308 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 TTC30BQ8N4P2 665 aa17.17■□□□□ 0.34
BRAT1-206ENST00000493232 CSF1RP07333 972 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 SERPINB9P50453 376 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 ST8SIA6P61647 398 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 ATPAF2Q8N5M1 289 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 FOXP3Q9BZS1 431 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 MLXIPLQ9NP71 852 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 TERF2Q15554 542 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 CHST13Q8NET6 341 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 SMAPO00193 183 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 DYNC1LI2O43237 492 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-206ENST00000493232 CAMTA2O94983 1202 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 AGTP01019 485 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 TRAPPC11Q7Z392 1133 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 COG1Q8WTW3 980 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 FAM161BQ96MY7 647 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 MKNK1Q9BUB5 465 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 P4HA2O15460 535 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
BRAT1-206ENST00000493232 SV2CQ496J9 727 aa17.16■□□□□ 0.34
BRAT1-206ENST00000493232 DCP1BQ8IZD4 617 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms