RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DKC1O60832 514 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 WFS1O76024 890 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 TBX18O95935 607 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 F9P00740 461 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 HOXC8P31273 242 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 CLCN7P51798 805 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 EPS8Q12929 822 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ERV3-1Q14264 604 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 NPY5RQ15761 445 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 SMAD1Q15797 465 aaKnown RBP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 SLC5A9Q2M3M2 681 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 C5orf22Q49AR2 442 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 NFRKBQ6P4R8 1299 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 GAS2L3Q86XJ1 694 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 FAM20CQ8IXL6 584 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 GPR156Q8NFN8 814 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 RGMAQ96B86 450 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 SNX22Q96L94 193 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 PHF7Q9BWX1 381 aaPredicted RBP3.44□□□□□ -1.86
UBXN4-208ENST00000490163 SACM1LQ9NTJ5 587 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 MTMR10Q9NXD2 777 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 VPS51Q9UID3 782 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ODF2LQ9ULJ1 636 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 CYP46A1Q9Y6A2 500 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 IRS2Q9Y4H2 1338 aa3.44□□□□□ -1.86
UBXN4-208ENST00000490163 ERCC6L2Q5T890 1561 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 LGALS16A8MUM7 142 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 CDRT15L2A8MXV6 281 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 EIF3FO00303 357 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 NPHP1O15259 732 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 HTATSF1O43719 755 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 IGHDP01880 384 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 CHGBP05060 677 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ELNP15502 786 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 FDXRP22570 491 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 SREBF1P36956 1147 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PPM1FP49593 454 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PCBP4P57723 403 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 SESN2P58004 480 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 NRG1Q02297 640 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ANO7Q6IWH7 933 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 BORAQ6PGQ7 559 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 RSRC2Q7L4I2 434 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 TTC30BQ8N4P2 665 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 TSPAN18Q96SJ8 248 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 CERS4Q9HA82 394 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 NFKBIL1Q9UBC1 381 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 EBF1Q9UH73 591 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 MAP3K4Q9Y6R4 1608 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 NPHP3-ACAD11A0A0J9YXS1 232 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 M0R082 166 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ACKR2O00590 384 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 NFIBO00712 420 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PCDH17O14917 1159 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 MAN1A2O60476 641 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 RARBP10826 455 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 EGR1P18146 543 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 LORP23490 312 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 KCNJ6P48051 423 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 MBTPS1Q14703 1052 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 LLGL1Q15334 1064 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 GRAMD1CQ8IYS0 662 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 TDRD7Q8NHU6 1098 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ZNF417Q8TAU3 575 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 CDHR1Q96JP9 859 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ZNF587Q96SQ5 575 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ZC3H12CQ9C0D7 883 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PABPC3Q9H361 631 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 OBP2BQ9NPH6 170 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 AFF4Q9UHB7 1163 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PCDHGB6Q9Y5F9 930 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ARHGAP35Q9NRY4 1499 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 GLI2P10070 1586 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 TCRBV5S2A0A599 114 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 HRKO00198 91 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PRPF6O94906 941 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PARP1P09874 1014 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 IFIT1P09914 478 aaKnown RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PTPN2P17706 415 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 SMARCA1P28370 1054 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ASPAP45381 313 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 STARD6P59095 220 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 NFATC3Q12968 1075 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 SP140Q13342 867 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ADAM15Q13444 863 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 RAB39AQ14964 217 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 NKPD1Q17RQ9 610 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 GDF6Q6KF10 455 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-208ENST00000490163 CRTC3Q6UUV7 619 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 Q6ZVL8 140 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 PPP1R32Q7Z5V6 425 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 FAM9BQ8IZU0 186 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 GALNT4Q8N4A0 578 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 DCBLD1Q8N8Z6 715 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 SEC14L1Q92503 715 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 BORCS6Q96GS4 357 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 FAM227BQ96M60 508 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 HEPHQ9BQS7 1158 aa3.43□□□□□ -1.86
UBXN4-208ENST00000490163 ACE2Q9BYF1 805 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms