RNA–Protein interactions for RNA: ENST00000489770.1

SETD3-208, Transcript of SET domain containing 3, human

TSL 5

Gene SETD3, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SETD3-208	ENST00000489770	PCDHB12	Q9Y5F1	795 aa		11.2	□□□□□ -0.62
SETD3-208	ENST00000489770	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.2	□□□□□ -0.62
SETD3-208	ENST00000489770	SLC4A4	Q9Y6R1	1079 aa		11.2	□□□□□ -0.62
SETD3-208	ENST00000489770	LCT	P09848	1927 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	LOC400499	M0QZD8	3231 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	WDFY3	Q8IZQ1	3526 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	CYSRT1	A8MQ03	144 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	TBC1D4	O60343	1298 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	SURF6	O75683	361 aa	Known RBP	11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	GATM	P50440	423 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	ETF1	P62495	437 aa	Known RBP	11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	ADAM17	P78536	824 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	MGAT3	Q09327	533 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	APOBR	Q0VD83	1088 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	TSNAXIP1	Q2TAA8	658 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	HSDL1	Q3SXM5	330 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	DTX1	Q86Y01	620 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	STK11IP	Q8N1F8	1099 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	SSH3	Q8TE77	659 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	ATRIP	Q8WXE1	791 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	NELL1	Q92832	810 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	CHMP4C	Q96CF2	233 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	TMEM74	Q96NL1	305 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	TCF25	Q9BQ70	676 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	RSRP1	Q9BUV0	290 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	WNT10A	Q9GZT5	417 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	NGRN	Q9NPE2	291 aa	Known RBP	11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	TMEM260	Q9NX78	707 aa		11.19	□□□□□ -0.62
SETD3-208	ENST00000489770	CEP295	Q9C0D2	2601 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	GFRA2	O00451	464 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	GOLIM4	O00461	696 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	PF4	P02776	101 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	CAMK2G	Q13555	558 aa	Predicted RBP	11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	PWP1	Q13610	501 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	MSMP	Q1L6U9	139 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	XRRA1	Q6P2D8	792 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	ACSF2	Q96CM8	615 aa	Predicted RBP	11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	FBRS	Q9HAH7	460 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	IGSF9	Q9P2J2	1179 aa		11.18	□□□□□ -0.62
SETD3-208	ENST00000489770	PLIN4	Q96Q06	1357 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	SRRM3	A6NNA2	597 aa	Predicted RBP	11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	PRDM1	O75626	825 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	CHGB	P05060	677 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	STAG3L1	P0CL83	205 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	ATP8B2	P98198	1209 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	FBXO47	Q5MNV8	452 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	RARS2	Q5T160	578 aa	Known RBP	11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	BTNL9	Q6UXG8	535 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	RUFY4	Q6ZNE9	571 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	OTOP3	Q7RTS5	596 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	C12orf76	Q8N812	135 aa	Predicted RBP	11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	RGS22	Q8NE09	1264 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	FEZF2	Q8TBJ5	459 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	MRPS27	Q92552	414 aa	Known RBP	11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	RHOV	Q96L33	236 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	AGO3	Q9H9G7	860 aa	Known RBP	11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	SETD4	Q9NVD3	440 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	ZSCAN32	Q9NX65	697 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	GMEB2	Q9UKD1	530 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	CA14	Q9ULX7	337 aa		11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	GCN1	Q92616	2671 aa	Known RBP	11.17	□□□□□ -0.62
SETD3-208	ENST00000489770	MINDY4B	A8MYZ0	360 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	GNAT1	P11488	350 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	RPL6	Q02878	288 aa	Known RBP	11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	STXBP2	Q15833	593 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	CELF3	Q5SZQ8	465 aa	Known RBP	11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	DIEXF	Q68CQ4	756 aa	Known RBP	11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	ARMCX6	Q7L4S7	300 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	THNSL1	Q8IYQ7	743 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	MRPL43	Q8N983	215 aa	Known RBP	11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	PJA1	Q8NG27	643 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	SPATA33	Q96N06	139 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	IWS1	Q96ST2	819 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	GPR20	Q99678	358 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	ENTPD7	Q9NQZ7	604 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	KBTBD4	Q9NVX7	518 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	PUF60	Q9UHX1	559 aa	Known RBP	11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	MRVI1	Q9Y6F6	885 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	TTC3	P53804	2025 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	FANCM	Q8IYD8	2048 aa		11.16	□□□□□ -0.62
SETD3-208	ENST00000489770	BPTF	Q12830	3046 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	LAMA5	O15230	3695 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	LAMTOR5	O43504	91 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	LRP3	O75074	770 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	CLASP2	O75122	1294 aa	Known RBP	11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	LRRN2	O75325	713 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	SRF	P11831	508 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	SLC16A2	P36021	539 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	RARS	P54136	660 aa	Known RBP	11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	FAM160A1	Q05DH4	1040 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	UBE3C	Q15386	1083 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	GIMAP6	Q6P9H5	292 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	TSHZ1	Q6ZSZ6	1077 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	COLGALT1	Q8NBJ5	622 aa		11.15	□□□□□ -0.62
SETD3-208	ENST00000489770	NSUN6	Q8TEA1	469 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms