RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RNF43Q68DV7 783 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 TCEAL6Q6IPX3 200 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 NFXL1Q6ZNB6 911 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 Q6ZS52 159 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 TCEAL3Q969E4 200 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 ELSPBP1Q96BH3 223 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 SPSB2Q99619 263 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 SCNM1Q9BWG6 230 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 MINDY3Q9H8M7 445 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 DISC1Q9NRI5 854 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 RBM12Q9NTZ6 932 aaKnown RBP10.28□□□□□ -0.76
SSBP1-212ENST00000489378 ADAM28Q9UKQ2 775 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 HES2Q9Y543 173 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 PIAS3Q9Y6X2 628 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 ADAMTS20P59510 1910 aa10.28□□□□□ -0.76
SSBP1-212ENST00000489378 SMCO2A6NFE2 343 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 PAPSS2O95340 614 aaPredicted RBP10.27□□□□□ -0.77
SSBP1-212ENST00000489378 POU2F2P09086 479 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 CCNE1P24864 410 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 RBM25P49756 843 aaKnown RBP10.27□□□□□ -0.77
SSBP1-212ENST00000489378 DNM2P50570 870 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 PRR16Q569H4 304 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 WDR44Q5JSH3 913 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 TRMT61BQ9BVS5 477 aaKnown RBP10.27□□□□□ -0.77
SSBP1-212ENST00000489378 EIF2AQ9BY44 585 aaKnown RBP10.27□□□□□ -0.77
SSBP1-212ENST00000489378 NIFKQ9BYG3 293 aaKnown RBP10.27□□□□□ -0.77
SSBP1-212ENST00000489378 UBN1Q9NPG3 1134 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 GDE1Q9NZC3 331 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 IPPQ9Y573 584 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 FREM2Q5SZK8 3169 aa10.27□□□□□ -0.77
SSBP1-212ENST00000489378 CACNA1EQ15878 2313 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 CCDC69A6NI79 296 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 SH2B2O14492 632 aaPredicted RBP10.26□□□□□ -0.77
SSBP1-212ENST00000489378 CHMP2AO43633 222 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 PRC1O43663 620 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 RHOP08100 348 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 RAP1GAPP47736 663 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 SETQ01105 290 aaPredicted RBP10.26□□□□□ -0.77
SSBP1-212ENST00000489378 FAM78AQ5JUQ0 283 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 AXDND1Q5T1B0 1012 aaPredicted RBP10.26□□□□□ -0.77
SSBP1-212ENST00000489378 KBTBD6Q86V97 674 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 WDR5BQ86VZ2 330 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 MAP4K3Q8IVH8 894 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 TEX2Q8IWB9 1127 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 GSTCDQ8NEC7 633 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 LNX1Q8TBB1 728 aaPredicted RBP10.26□□□□□ -0.77
SSBP1-212ENST00000489378 HASPINQ8TF76 798 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 LENG9Q96B70 501 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 LOXL4Q96JB6 756 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 PAAF1Q9BRP4 392 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 APOL6Q9BWW8 343 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 ZNF334Q9HCZ1 680 aaPredicted RBP10.26□□□□□ -0.77
SSBP1-212ENST00000489378 VWA8A3KMH1 1905 aa10.26□□□□□ -0.77
SSBP1-212ENST00000489378 C4orf47A7E2U8 309 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 MAFO75444 373 aaPredicted RBP10.25□□□□□ -0.77
SSBP1-212ENST00000489378 TADA2AO75478 443 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 CALM1P0DP23 149 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 CALM2P0DP24 149 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 CALM3P0DP25 149 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 GDI1P31150 447 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 MPLP40238 635 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 FUT2Q10981 343 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 PSMD5Q16401 504 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 SH3PXD2AQ5TCZ1 1133 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 KIAA1211LQ6NV74 962 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 CEP57Q86XR8 500 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 FANCBQ8NB91 859 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 PIK3R5Q8WYR1 880 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 IRF7Q92985 503 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 GJA10Q969M2 543 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 TTPALQ9BTX7 342 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 UNC45AQ9H3U1 944 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 OSBPL3Q9H4L5 887 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 ZFP14Q9HCL3 533 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 PDCD11Q14690 1871 aaKnown RBP10.25□□□□□ -0.77
SSBP1-212ENST00000489378 BPTFQ12830 3046 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 NCANO14594 1321 aa10.25□□□□□ -0.77
SSBP1-212ENST00000489378 SF3B1O75533 1304 aaKnown RBP eCLIP10.25□□□□□ -0.775e-6■■■□□ 17.1
SSBP1-212ENST00000489378 SRGAP2CP0DJJ0 459 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 HOXA6P31267 233 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 PXNP49023 591 aaPredicted RBP10.24□□□□□ -0.77
SSBP1-212ENST00000489378 UVSSAQ2YD98 709 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 XKR3Q5GH77 459 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 FAM171A1Q5VUB5 890 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 C19orf48Q6RUI8 117 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 CASC1Q6TDU7 716 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 VITQ6UXI7 678 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 CNNM3Q8NE01 707 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 GAB3Q8WWW8 586 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 TCEAL4Q96EI5 215 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 EDEM2Q9BV94 578 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 TRPV5Q9NQA5 729 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 BARHL2Q9NY43 387 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 EML5Q05BV3 1969 aa10.24□□□□□ -0.77
SSBP1-212ENST00000489378 ASCC3Q8N3C0 2202 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms