RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 FUBP3Q96I24 572 aaKnown RBP eCLIP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PHF12Q96QT6 1004 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 FERD3LQ96RJ6 166 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TM6SF1Q9BZW5 370 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 UNKQ9C0B0 810 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 STX8Q9UNK0 236 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 N6AMT1Q9Y5N5 214 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 KIAA1671Q9BY89 1806 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 EIF3FO00303 357 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SPTLC2O15270 562 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SNUPNO95149 360 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PTH1RQ03431 593 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 COX10Q12887 443 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SART3Q15020 963 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 MEA1Q16626 185 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 IFIT1BQ5T764 474 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 CWC27Q6UX04 472 aaKnown RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 RETREG3Q86VR2 466 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 ESX1Q8N693 406 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TRIML1Q8N9V2 468 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 GSDMBQ8TAX9 411 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SP7Q8TDD2 431 aaPredicted RBP5.81□□□□□ -1.48
CCDC39-205ENST00000485055 TSGA13Q96PP4 275 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 PDCD2LQ9BRP1 358 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SPATA9Q9BWV2 254 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 INCENPQ9NQS7 918 aa5.81□□□□□ -1.48
CCDC39-205ENST00000485055 SCN5AQ14524 2016 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 B4E1Z4 1266 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 KLRF2D3W0D1 207 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 HSPA4LO95757 839 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 MT-ND3P03897 115 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 MMP3P08254 477 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 CCND1P24385 295 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 ITGB8P26012 769 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 MCM5P33992 734 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 HADHAP40939 763 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 YARSP54577 528 aaKnown RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 CENPCQ03188 943 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 PGM5Q15124 567 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 CELF3Q5SZQ8 465 aaKnown RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 SLC30A10Q6XR72 485 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 DSTYKQ6XUX3 929 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 PPM1NQ8N819 430 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 FAM156AQ8NDB6 213 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 ADAMTS18Q8TE60 1221 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 UCMAQ8WVF2 138 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 KAT2BQ92831 832 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 GUCD1Q96NT3 240 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 SLC9A7Q96T83 725 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 KIF2CQ99661 725 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 UBAC1Q9BSL1 405 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 WDR11Q9BZH6 1224 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 LMAN2LQ9H0V9 348 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 SEMA6BQ9H3T3 888 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 GPRC5BQ9NZH0 403 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 COL20A1Q9P218 1284 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 POLHQ9Y253 713 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 ANKRD6Q9Y2G4 727 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 BOLA1Q9Y3E2 137 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 UBIAD1Q9Y5Z9 338 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 PCNTO95613 3336 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 IGKV6D-21A0A0A0MT36 114 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 LINC00854A0A1B0GVQ3 168 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 MASP2O00187 686 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 SLC27A2O14975 620 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 MUSKO15146 869 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 XPOTO43592 962 aaKnown RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 CYTH3O43739 400 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 RFPL3O75679 317 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 DNAJC8O75937 253 aaPredicted RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 NEK4P51957 841 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 TRDNQ13061 729 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 BFSP2Q13515 415 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 PPP2R5DQ14738 602 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 TAF5Q15542 800 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 KAZNQ674X7 775 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 TLDC1Q6P9B6 456 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 LSRQ86X29 649 aaPredicted RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 ST13P5Q8NFI4 369 aaPredicted RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 ASB12Q8WXK4 309 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 DDX1Q92499 740 aaKnown RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 BADQ92934 168 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 RILPL2Q969X0 211 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 SDF4Q9BRK5 362 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 UTP6Q9NYH9 597 aaKnown RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 RBM8AQ9Y5S9 174 aaKnown RBP5.8□□□□□ -1.48
CCDC39-205ENST00000485055 ITIH6Q6UXX5 1313 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 KDM3AQ9Y4C1 1321 aa5.8□□□□□ -1.48
CCDC39-205ENST00000485055 COL1A2P08123 1366 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 DOCK5Q9H7D0 1870 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 C17orf113A0A1B0GUU1 675 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 LTFP02788 710 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 CCND2P30279 289 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 STIP1P31948 543 aaKnown RBP5.79□□□□□ -1.48
CCDC39-205ENST00000485055 STAT1P42224 750 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 PPFIA1Q13136 1202 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 GRB10Q13322 594 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 SEMA3AQ14563 771 aa5.79□□□□□ -1.48
CCDC39-205ENST00000485055 SHHQ15465 462 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms