RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SLC13A1Q9BZW2 595 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 ZNF277Q9NRM2 450 aaPredicted RBP6.59□□□□□ -1.35
CCDC171-207ENST00000478913 PUF60Q9UHX1 559 aaKnown RBP6.59□□□□□ -1.35
CCDC171-207ENST00000478913 COL14A1Q05707 1796 aaKnown RBP6.59□□□□□ -1.35
CCDC171-207ENST00000478913 LTBP1Q14766 1721 aa6.59□□□□□ -1.36
CCDC171-207ENST00000478913 COL24A1Q17RW2 1714 aa6.59□□□□□ -1.36
CCDC171-207ENST00000478913 FMN2Q9NZ56 1722 aa6.59□□□□□ -1.36
CCDC171-207ENST00000478913 PIEZO1Q92508 2521 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 B8ZZF3 427 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 PRAMEF4O60810 478 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 EPHB4P54760 987 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 ATP2C1P98194 919 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-207ENST00000478913 MEF2AQ02078 507 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-207ENST00000478913 HGFACQ04756 655 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 ANO4Q32M45 955 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 GLB1L3Q8NCI6 653 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-207ENST00000478913 FATE1Q969F0 183 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 NEIL1Q96FI4 390 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-207ENST00000478913 TEPSINQ96N21 525 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 SLC2A13Q96QE2 648 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 LRRC37BQ96QE4 947 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 LMF1Q96S06 567 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 SLC6A15Q9H2J7 730 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 C12orf65Q9H3J6 166 aaKnown RBP6.58□□□□□ -1.36
CCDC171-207ENST00000478913 SEC61A2Q9H9S3 476 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 AASDHPPTQ9NRN7 309 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 THRAP3Q9Y2W1 955 aaKnown RBP6.58□□□□□ -1.36
CCDC171-207ENST00000478913 ATP7BP35670 1465 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 PAPPAQ13219 1627 aa6.58□□□□□ -1.36
CCDC171-207ENST00000478913 RANBP2P49792 3224 aaKnown RBP6.57□□□□□ -1.36
CCDC171-207ENST00000478913 A0A1W2PR48 441 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 PCDHGA12O60330 932 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 ALDH1A2O94788 518 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 TOX4O94842 621 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 SNUPNO95149 360 aaKnown RBP6.57□□□□□ -1.36
CCDC171-207ENST00000478913 LTA4HP09960 611 aaKnown RBP6.57□□□□□ -1.36
CCDC171-207ENST00000478913 KIR2DL3P43628 341 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 ADRM1Q16186 407 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 BTNL9Q6UXG8 535 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 ANKRD53Q8N9V6 530 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 JADE3Q92613 823 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 TEKT5Q96M29 485 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 OAZ3Q9UMX2 235 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 JAG2Q9Y219 1238 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 PCDHGA9Q9Y5G4 932 aaKnown RBP6.57□□□□□ -1.36
CCDC171-207ENST00000478913 PCDHGA8Q9Y5G5 932 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 PCDHGA7Q9Y5G6 932 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 PCDHGA6Q9Y5G7 932 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 PCDHGA3Q9Y5H0 932 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 PCDHGA2Q9Y5H1 932 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 SSH2Q76I76 1423 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 KIAA0232Q92628 1395 aa6.57□□□□□ -1.36
CCDC171-207ENST00000478913 SLC26A4O43511 780 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 TMEM127O75204 238 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 PLATP00750 562 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 JUNP05412 331 aaKnown RBP6.56□□□□□ -1.36
CCDC171-207ENST00000478913 DPEP1P16444 411 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 CR2P20023 1033 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 ADCY7P51828 1080 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 MALLQ13021 153 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 ACAP1Q15027 740 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 MUM1L1Q5H9M0 696 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 ZFYVE27Q5T4F4 411 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 SLFN13Q68D06 897 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 CFHR4Q92496 578 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 HOOK2Q96ED9 719 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 RPL10LQ96L21 214 aaKnown RBP6.56□□□□□ -1.36
CCDC171-207ENST00000478913 DPYSL5Q9BPU6 564 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 MTMR10Q9NXD2 777 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 SPATA31E1Q6ZUB1 1445 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 CEP152O94986 1710 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 XRN1Q8IZH2 1706 aaKnown RBP6.56□□□□□ -1.36
CCDC171-207ENST00000478913 PEAK1Q9H792 1746 aa6.56□□□□□ -1.36
CCDC171-207ENST00000478913 BRD4O60885 1362 aaPredicted RBP6.56□□□□□ -1.36
CCDC171-207ENST00000478913 MATN2O00339 956 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 MTSS1O43312 755 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 PRICKLE3O43900 615 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-207ENST00000478913 CDC14BO60729 498 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 NDUFS2O75306 463 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 VSIG10L2P0DP72 767 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 HOXA5P20719 270 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 RECQLP46063 649 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-207ENST00000478913 EPHB1P54762 984 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 MCL1Q07820 350 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 TBC1D10BQ4KMP7 808 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-207ENST00000478913 FAM180AQ6UWF9 173 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 TAS1R1Q7RTX1 841 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 PPM1NQ8N819 430 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 SHCBP1Q8NEM2 672 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 RABGGTAQ92696 567 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 PTPN18Q99952 460 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 ADI1Q9BV57 179 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 MEGF9Q9H1U4 602 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 GREM2Q9H772 168 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 MSL2Q9HCI7 577 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 TLR9Q9NR96 1032 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 ING3Q9NXR8 418 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 RTEL1Q9NZ71 1219 aa6.55□□□□□ -1.36
CCDC171-207ENST00000478913 LUC7L2Q9Y383 392 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms